RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 MFAP2P55001 183 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 TPPP2P59282 170 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 RPL23AP62750 156 aaKnown RBP8.21□□□□□ -1.1
SMC1A-206ENST00000470241 TNFRSF9Q07011 255 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 C11orf87Q6NUJ2 197 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 TMEM65Q6PI78 240 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 OR4D5Q8NGN0 318 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 SLA2Q9H6Q3 261 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 ZFP57Q9NU63 452 aa8.21□□□□□ -1.1
SMC1A-206ENST00000470241 TSSC4Q9Y5U2 329 aaPredicted RBP8.21□□□□□ -1.1
SMC1A-206ENST00000470241 IGLV11-55A0A075B6I3 123 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 C13orf42A0A1B0GVH6 325 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 OR2J3O76001 311 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 ERHP84090 104 aaKnown RBP8.2□□□□□ -1.1
SMC1A-206ENST00000470241 RHOGP84095 191 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 DEFA5Q01523 94 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 ID3Q02535 119 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-206ENST00000470241 KHDC1LQ5JSQ8 128 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
SMC1A-206ENST00000470241 ZNF491Q8N8L2 437 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 ZBTB8BQ8NAP8 495 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-206ENST00000470241 ZNF114Q8NC26 417 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 P2RX4Q99571 388 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 RBKSQ9H477 322 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 GNB4Q9HAV0 340 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 CACFD1Q9UGQ2 172 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 F11RQ9Y624 299 aaKnown RBP8.2□□□□□ -1.1
SMC1A-206ENST00000470241 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
SMC1A-206ENST00000470241 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 FAM25EA8MYX2 175 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 GOSR2O14653 212 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 NDUFB8O95169 186 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
SMC1A-206ENST00000470241 DEFA4P12838 97 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-206ENST00000470241 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 PVRIGQ6DKI7 326 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 OR1P1Q8NH06 330 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 DTD1Q8TEA8 209 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 UBE2E2Q96LR5 201 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 HEYLQ9NQ87 328 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-206ENST00000470241 GSKIPQ9P0R6 139 aa8.19□□□□□ -1.1
SMC1A-206ENST00000470241 C5orf51A6NDU8 294 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 FAM223BA6NKX1 122 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 SSNA1O43805 119 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 SIX6O95475 246 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 IGHV3-11P01762 117 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 HIST1H1BP16401 226 aaKnown RBP8.18□□□□□ -1.1
SMC1A-206ENST00000470241 NKX2-1P43699 371 aaPredicted RBP8.18□□□□□ -1.1
SMC1A-206ENST00000470241 POLR2GP62487 172 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC1A-206ENST00000470241 IL15RAQ13261 267 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 SLC25A24Q6NUK1 477 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 GSG1LQ6UXU4 331 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 C8orf86Q6ZUL3 223 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 FAM223AQ8IWN6 122 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 NECAP1Q8NC96 275 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 OR1L6Q8NGR2 347 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 TMEM170AQ8WVE7 144 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 USMG5Q96IX5 58 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 C2orf50Q96LR7 162 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 OR5B12Q96R08 314 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 FBXL7Q9UJT9 491 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 STAB1Q9NY15 2570 aa8.18□□□□□ -1.1
SMC1A-206ENST00000470241 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 I3L521 148 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 SYNGR2O43760 224 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 MED6O75586 246 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 MBPP02686 304 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-206ENST00000470241 IAPPP10997 89 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 SNCAP37840 140 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 HTR2BP41595 481 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 RUNX1Q01196 453 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 ATP5G2Q06055 141 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 C15orf32Q32M92 178 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 KLHL30-AS1Q8NEE0 82 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 SLC24A4Q8NFF2 622 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 HIPK2Q9H2X6 1198 aa8.17□□□□□ -1.1
SMC1A-206ENST00000470241 TET2Q6N021 2002 aaPredicted RBP8.17□□□□□ -1.1
SMC1A-206ENST00000470241 A0A0G2JLM5 398 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 MFSD2BA6NFX1 497 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 I3L2K1 104 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 K7EIM0 57 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 CYB5BO43169 146 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 TMEM50AO95807 157 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 TSPAN15O95858 294 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 LGALS1P09382 135 aaKnown RBP8.16□□□□□ -1.1
SMC1A-206ENST00000470241 CXCL3P19876 107 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 SUB1P53999 127 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMC1A-206ENST00000470241 H2BFSP57053 126 aa8.16□□□□□ -1.1
SMC1A-206ENST00000470241 EXOSC2Q13868 293 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms