RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CDK2P24941 298 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 PEBP1P30086 187 aaKnown RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 GZMMP51124 257 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 AQP4P55087 323 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MP68P56378 58 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 HSPE1P61604 102 aaKnown RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 IFITM2Q01629 132 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 FABP9Q0Z7S8 132 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 JOSD1Q15040 202 aaPredicted RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 DEFB133Q30KQ1 61 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 C6orf52Q5T4I8 152 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 SAMD13Q5VXD3 122 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 KDM4DQ6B0I6 523 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 ELP2Q6IA86 826 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 SPINK14Q6IE38 97 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF676Q8N7Q3 588 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 OR4M1Q8NGD0 313 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 OR8S1Q8NH09 359 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 C15orf40Q8WUR7 153 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 ACOT12Q8WYK0 555 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 CCL17Q92583 94 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MAL2Q969L2 176 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 CLDN23Q96B33 292 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 RBMXL1Q96E39 390 aaKnown RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 OR7D2Q96RA2 312 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 LINC01587Q99440 93 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 GINS3Q9BRX5 216 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 CCDC32Q9BV29 185 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 DPY30Q9C005 99 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 COMMD5Q9GZQ3 224 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MAP1LC3BQ9GZQ8 125 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 AICDAQ9GZX7 198 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 ABCG5Q9H222 651 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 LRTM1Q9HBL6 345 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 RSL24D1Q9UHA3 163 aaKnown RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 OR52A1Q9UKL2 312 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 SLC22A7Q9Y694 548 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 DOCK10Q96BY6 2186 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 KMT2EQ8IZD2 1858 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 IGLV3-16A0A075B6K0 115 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 A0A1B0GXF2 115 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 C5orf63A6NC05 138 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 PRORSD1PA6NEY8 169 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 C9JQL5 133 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 F5H5P2 479 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 C15orf65H3BRN8 121 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 M0R129 80 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 KPNA4O00629 521 aaPredicted RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ARPC5O15511 151 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 COX7A2P2O60397 106 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SRSF10O75494 262 aaKnown RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SULT1C4O75897 302 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF682O95780 498 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CRYZL1O95825 349 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 EPPINO95925 133 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 APOC1P02654 83 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 APCSP02743 223 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 C8GP07360 202 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 TLX1NBP0CAT3 122 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV1-8P0DP01 117 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CTSEP14091 401 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CTLA4P16410 223 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IL1RNP18510 177 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ELK1P19419 428 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ERP29P30040 261 aaKnown RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 S100A3P33764 101 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 GABARAPL2P60520 117 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 RPL26P61254 145 aaKnown RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 RHOBP62745 196 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 PSPHP78330 225 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 HLA-DRB3P79483 266 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 FABP5Q01469 135 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 TMEM267Q0VDI3 215 aaPredicted RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IAH1Q2TAA2 248 aaPredicted RBP2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF404Q494X3 552 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ABCA11PQ4W5N1 156 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 KLHL12Q53G59 568 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SPATA31B1PQ5VZV4 182 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 NANOGP8Q6NSW7 305 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 NOXRED1Q6NXP6 359 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 TMEM205Q6UW68 189 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 IZUMO2Q6UXV1 221 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 SHISA6Q6ZSJ9 500 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 NEGR1Q7Z3B1 354 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 DOLPP1Q86YN1 238 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 MSRB3Q8IXL7 192 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 DRAM1Q8N682 238 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ANKRD29Q8N6D5 301 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 TSTD1Q8NFU3 115 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 LMX1AQ8TE12 382 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CT55Q8WUE5 264 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ORAOV1Q8WV07 137 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 CANT1Q8WVQ1 401 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 ROPN1LQ96C74 230 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 NEURL3Q96EH8 262 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 COX14Q96I36 57 aa2.53□□□□□ -2
HMGB1P25-201ENST00000468402 KCNS1Q96KK3 526 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms