RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ETV7Q9Y603 341 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 HERC2O95714 4834 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 K7EIM0 57 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 K7EMT4 169 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 MRPS14O60783 128 aaKnown RBP11.28□□□□□ -0.6
CMSS1-202ENST00000463526 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-202ENST00000463526 SNAPC5O75971 98 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-202ENST00000463526 F2RP25116 425 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 RFX2P48378 723 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
CMSS1-202ENST00000463526 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 FCAMRQ8WWV6 532 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 RARRES2Q99969 163 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 RAB26Q9ULW5 256 aa11.28□□□□□ -0.6
CMSS1-202ENST00000463526 C15orf62A8K5M9 175 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 MPTX1A8MV57 137 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 CHEK1O14757 476 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 PMP2P02689 132 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 CTSGP08311 255 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 CBX5P45973 191 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 MISP3Q96FF7 219 aa11.27□□□□□ -0.61
CMSS1-202ENST00000463526 ZNF2Q9BSG1 426 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-202ENST00000463526 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 A6NJ64 397 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 DEFB4AO15263 64 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 NUPL2O15504 423 aaKnown RBP11.26□□□□□ -0.61
CMSS1-202ENST00000463526 IGHV3-48P01763 117 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 FGF2P09038 288 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 SCAND1P57086 179 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 BORCS5Q969J3 196 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 SLC25A46Q96AG3 418 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 DGCR14Q96DF8 476 aaKnown RBP11.26□□□□□ -0.61
CMSS1-202ENST00000463526 TMEM56Q96MV1 263 aa11.26□□□□□ -0.61
CMSS1-202ENST00000463526 DBX1A6NMT0 343 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 IFNA4P05014 189 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-202ENST00000463526 DHRS11Q6UWP2 260 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 ZNF414Q96IQ9 312 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
CMSS1-202ENST00000463526 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 MFAP4P55083 255 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-202ENST00000463526 RBMS2Q15434 407 aaKnown RBP11.24□□□□□ -0.61
CMSS1-202ENST00000463526 PHLDA2Q53GA4 152 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 GATAD1Q8WUU5 269 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 PINX1Q96BK5 328 aaKnown RBP11.24□□□□□ -0.61
CMSS1-202ENST00000463526 CMTM3Q96MX0 182 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 FXYD6Q9H0Q3 95 aa11.24□□□□□ -0.61
CMSS1-202ENST00000463526 GPR31O00270 319 aa11.23□□□□□ -0.61
CMSS1-202ENST00000463526 XRCC3O43542 346 aa11.23□□□□□ -0.61
CMSS1-202ENST00000463526 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
CMSS1-202ENST00000463526 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
CMSS1-202ENST00000463526 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
CMSS1-202ENST00000463526 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
CMSS1-202ENST00000463526 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 I3L2K1 104 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 MT-CO2P00403 227 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 CA1P00915 261 aaPredicted RBP11.22□□□□□ -0.61
CMSS1-202ENST00000463526 TGFBR1P36897 503 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 PRR20EP86478 221 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 PRR20CP86479 221 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 PRR20DP86480 221 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 PRR20BP86481 221 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 PRR20AP86496 221 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 NEDD8Q15843 81 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 MFFQ9GZY8 342 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
CMSS1-202ENST00000463526 DNASE2O00115 360 aaPredicted RBP11.21□□□□□ -0.61
CMSS1-202ENST00000463526 GNG7O60262 68 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 EIF4EP06730 217 aaKnown RBP11.21□□□□□ -0.61
CMSS1-202ENST00000463526 HLA-DMAP28067 261 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 TAS2R46P59540 309 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 TAS2R20P59543 309 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 DEFB131AP59861 70 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 RPL11P62913 178 aaKnown RBP11.21□□□□□ -0.61
CMSS1-202ENST00000463526 PAFAH1B2P68402 229 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 TMEM69Q5SWH9 247 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 OR6F1Q8NGZ6 308 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 OR4A16Q8NH70 328 aa11.21□□□□□ -0.61
CMSS1-202ENST00000463526 ST8SIA2Q92186 375 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms