RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SPAG16Q8N0X2 631 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 BEST4Q8NFU0 473 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 OR52B4Q8NGK2 314 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 OR13F1Q8NGS4 319 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 OR2K2Q8NGT1 345 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 OR51H1Q8NH63 302 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 OR4S2Q8NH73 311 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 TMEM167AQ8TBQ9 72 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 EEF1AKMT3Q96AZ1 226 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 SLC25A38Q96DW6 304 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 CENPOQ9BU64 300 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 SLC5A7Q9GZV3 580 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 VCX3BQ9H321 246 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 RHBDL2Q9NX52 303 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 TECRQ9NZ01 308 aaKnown RBP3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 UBQLN2Q9UHD9 624 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 BLOC1S6Q9UL45 172 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 RAB26Q9ULW5 256 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 SSR3Q9UNL2 185 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 NSG2Q9Y328 171 aa3.5□□□□□ -1.85
GTF3C3-208ENST00000455546 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 IGLV11-55A0A075B6I3 123 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 TEX50A0A1B0GTY4 177 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 IGLC7A0M8Q6 106 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 OR2T8A6NH00 312 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 ZNF207O43670 478 aaKnown RBP3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 CREBL2O60519 120 aaPredicted RBP3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 SLC22A5O76082 557 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 HPRT1P00492 218 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 PPYP01298 95 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 PMP2P02689 132 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 OR13C7P0DN81 318 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 HLA-GP17693 338 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 GALP22466 123 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 MAS1LP35410 378 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 LPAR6P43657 344 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 HSPA13P48723 471 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 OR2B8PP59922 312 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 EWSR1Q01844 656 aaKnown RBP eCLIP3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 NEDD8Q15843 81 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 AADACL3Q5VUY0 350 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 SUMO4Q6EEV6 95 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 SLC25A24Q6NUK1 477 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 PLET1Q6UQ28 207 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 TMEM17Q86X19 198 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 HOGA1Q86XE5 327 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 LAX1Q8IWV1 398 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 DMBX1Q8NFW5 382 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 VSTM2AQ8TAG5 236 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 C2CD4CQ8TF44 421 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 HINT2Q9BX68 163 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 TM2D2Q9BX73 214 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 AUNIPQ9H7T9 357 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 BET1LQ9NYM9 111 aa3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 DYNC2H1Q8NCM8 4307 aaKnown RBP3.49□□□□□ -1.85
GTF3C3-208ENST00000455546 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 LOC102724200A0A096LPH7 203 aaPredicted RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 IGHV3-49A0A0A0MS15 119 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 TRBV7-1A0A0A6YYK4 115 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 A0A0J9YWU9 116 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 CXorf65A6NEN9 183 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 MRPS14O60783 128 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 PGLYRP1O75594 196 aaPredicted RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 S1PR2O95136 353 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 ATP6V1G2O95670 118 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 NUDT3O95989 172 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 DHFRP00374 187 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 KRASP01116 189 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 IGHV3-48P01763 117 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 C8orf88P0DMB2 117 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 NQO2P16083 231 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 HIST1H1BP16401 226 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 GNRHRP30968 328 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 G6PCP35575 357 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 MFAP2P55001 183 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 GABARAPL2P60520 117 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 LSM3P62310 102 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 WT1-ASQ06250 92 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 TMEM88Q6PEY1 159 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 DHRS11Q6UWP2 260 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 RBPMS2Q6ZRY4 209 aaKnown RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 SLC16A13Q7RTY0 426 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 TMEM217Q8N7C4 229 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 UBAC2Q8NBM4 344 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 OR5AP2Q8NGF4 316 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 OR1L6Q8NGR2 347 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 OR4A5Q8NH83 315 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 ZNF502Q8TBZ5 544 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 GIMAP1Q8WWP7 306 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 FCAMRQ8WWV6 532 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 RNF125Q96EQ8 232 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 CXorf58Q96LI9 332 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 ZNF2Q9BSG1 426 aaPredicted RBP3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 CHRDL1Q9BU40 450 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 C20orf24Q9BUV8 137 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 GGTLC1Q9BX51 225 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 COMMD5Q9GZQ3 224 aa3.48□□□□□ -1.85
GTF3C3-208ENST00000455546 DIABLOQ9NR28 239 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms