RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 APOA2P02652 100 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 CRYBA1P05813 215 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 NPY1RP25929 384 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 ZNF137PP52743 207 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 ACOT6Q3I5F7 207 aaPredicted RBP8.67□□□□□ -1.02
PKP4-206ENST00000452162 MALRD1Q5VYJ5 2156 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
PKP4-206ENST00000452162 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 PIMREGQ9BSJ6 248 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 TRBV23-1A0A0A0MS06 115 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 A0A1W2PPE2 198 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 A0A1W2PPH5 198 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SOX15O60248 233 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 KBTBD11O94819 623 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 CA2P00918 260 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SAA1P0DJI8 122 aaPredicted RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 C11orf42Q8N5U0 333 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 MGST2Q99735 147 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 NIPSNAP3BQ9BS92 247 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 CHODLQ9H9P2 273 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 ENY2Q9NPA8 101 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 MLXQ9UH92 298 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.66□□□□□ -1.022e-7■■■□□ 18.1
PKP4-206ENST00000452162 SVEP1Q4LDE5 3571 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SMCO3A2RU48 225 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 NDUFS8O00217 210 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 HMGB3O15347 200 aaKnown RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 YIF1AO95070 293 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 IGHV2-70P01814 119 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 IFNA4P05014 189 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 IGHV1-8P0DP01 117 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SLC25A16P16260 332 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 OPRK1P41145 380 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 ARSJQ5FYB0 599 aaPredicted RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 RBMS3Q6XE24 437 aaKnown RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 OR10X1Q8NGY0 326 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 TMEM186Q96B77 213 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 TVP23CQ96ET8 276 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 YPEL4Q96NS1 127 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SMR3AQ99954 134 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
PKP4-206ENST00000452162 SONP18583 2426 aaKnown RBP8.66□□□□□ -1.02
PKP4-206ENST00000452162 A0A087WWC5 75 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 TEX50A0A1B0GTY4 177 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 CYB5BO43169 146 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 REG1BP48304 166 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.02
PKP4-206ENST00000452162 CD81P60033 236 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 DIAPH2-AS1Q14236 149 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 ZNF841Q6ZN19 808 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 HARBI1Q96MB7 349 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 WNK2Q9Y3S1 2297 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 ARHGAP32A7KAX9 2087 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 DEFA4P12838 97 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 MAS1LP35410 378 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 TAGLN2P37802 199 aaKnown RBP8.65□□□□□ -1.02
PKP4-206ENST00000452162 GPR6P46095 362 aaPredicted RBP8.65□□□□□ -1.02
PKP4-206ENST00000452162 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
PKP4-206ENST00000452162 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 PDPNQ86YL7 162 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 OR5B3Q8NH48 314 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 FKBP11Q9NYL4 201 aa8.65□□□□□ -1.02
PKP4-206ENST00000452162 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 FNDC10F2Z333 226 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
PKP4-206ENST00000452162 USF1P22415 310 aaPredicted RBP8.64□□□□□ -1.03
PKP4-206ENST00000452162 TMEM249Q2WGJ8 235 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 BSXQ3C1V8 233 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 RNF212Q495C1 297 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 LINC00518Q8N0U6 118 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 RAB1CQ92928 201 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 FLYWCH2Q96CP2 140 aaKnown RBP8.64□□□□□ -1.03
PKP4-206ENST00000452162 PCGF1Q9BSM1 259 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 TMEM133Q9H2Q1 129 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 PXMP4Q9Y6I8 212 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 OR2C1O95371 312 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 PSMB3P49720 205 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 LOXL1Q08397 574 aaPredicted RBP8.64□□□□□ -1.03
PKP4-206ENST00000452162 ZNF124Q15973 351 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 GATAD1Q8WUU5 269 aa8.64□□□□□ -1.03
PKP4-206ENST00000452162 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
PKP4-206ENST00000452162 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms