RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ZFAND1Q8TCF1 268 aa15.15■□□□□ 0.02
LRCH3-208ENST00000443727 MARC2Q969Z3 335 aa15.15■□□□□ 0.02
LRCH3-208ENST00000443727 SPATA25Q9BR10 227 aa15.15■□□□□ 0.02
LRCH3-208ENST00000443727 C21orf62Q9NYP8 219 aa15.15■□□□□ 0.02
LRCH3-208ENST00000443727 COPZ2Q9P299 210 aa15.15■□□□□ 0.02
LRCH3-208ENST00000443727 HUWE1Q7Z6Z7 4374 aaKnown RBP15.14■□□□□ 0.01
LRCH3-208ENST00000443727 IGKV1-39P01597 117 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 IGKV1D-39P04432 117 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 CD7P09564 240 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 MFAP2P55001 183 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 MRPS10P82664 201 aaKnown RBP15.14■□□□□ 0.01
LRCH3-208ENST00000443727 Q56UQ5 140 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 STEAP1BQ6NZ63 245 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 SLC16A13Q7RTY0 426 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 LHFPL1Q86WI0 220 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 CCDC71LQ8N9Z2 235 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 OR4D10Q8NGI6 311 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 TERB2Q8NHR7 220 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 BSCL2Q96G97 398 aaPredicted RBP15.14■□□□□ 0.01
LRCH3-208ENST00000443727 MLXQ9UH92 298 aa15.14■□□□□ 0.01
LRCH3-208ENST00000443727 ATG12O94817 140 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 AKR1C2P52895 323 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 TRIM16LQ309B1 348 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 SPSB3Q6PJ21 355 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 BTNL8Q6UX41 500 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 RBPMS2Q6ZRY4 209 aaKnown RBP15.13■□□□□ 0.01
LRCH3-208ENST00000443727 TMEM61Q8N0U2 210 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 OR1P1Q8NH06 330 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 MUC7Q8TAX7 377 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 SCARB1Q8WTV0 552 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 MISP3Q96FF7 219 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 DIRAS2Q96HU8 199 aa15.13■□□□□ 0.01
LRCH3-208ENST00000443727 C3orf85A0A1B0GTC6 90 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 OR11H12B2RN74 326 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 SCAF4O95104 1147 aaKnown RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 CD74P04233 296 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 TMBIM6P55061 237 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 ELLP55199 621 aaPredicted RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 HSPE1P61604 102 aaKnown RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 PRCDQ00LT1 54 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 SSBP1Q04837 148 aaKnown RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 IL18Q14116 193 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 MEF2DQ14814 521 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 OR13C8Q8NGS7 320 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 TP53RKQ96S44 253 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 ATP6V0BQ99437 205 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 BCL7BQ9BQE9 202 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 ZNF436Q9C0F3 470 aaPredicted RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 CCDC59Q9P031 241 aaKnown RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 MRPL27Q9P0M9 148 aaKnown RBP15.12■□□□□ 0.01
LRCH3-208ENST00000443727 CEPT1Q9Y6K0 416 aa15.12■□□□□ 0.01
LRCH3-208ENST00000443727 K7EIM0 57 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 ERHP84090 104 aaKnown RBP15.11■□□□□ 0.01
LRCH3-208ENST00000443727 IZUMO4Q1ZYL8 232 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 ANKRD55Q3KP44 614 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 OR2C3Q8N628 320 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 OR52B4Q8NGK2 314 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 RNASE11Q8TAA1 199 aaKnown RBP15.11■□□□□ 0.01
LRCH3-208ENST00000443727 MARCH1Q8TCQ1 289 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 TMEM190Q8WZ59 177 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 CITED4Q96RK1 184 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 C20orf24Q9BUV8 137 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 C6orf62Q9GZU0 229 aaPredicted RBP15.11■□□□□ 0.01
LRCH3-208ENST00000443727 SRD5A3Q9H8P0 318 aa15.11■□□□□ 0.01
LRCH3-208ENST00000443727 GAR1Q9NY12 217 aaKnown RBP15.11■□□□□ 0.01
LRCH3-208ENST00000443727 DISC1C4P0D8 188 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 RPL5P46777 297 aaKnown RBP15.1■□□□□ 0.01
LRCH3-208ENST00000443727 SP6Q3SY56 376 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 SPINK9Q5DT21 86 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 DYNC2LI1Q8TCX1 351 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 SMIM4Q8WVI0 70 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 CHRDL1Q9BU40 450 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 PDCD10Q9BUL8 212 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 WFDC10AQ9H1F0 79 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 DAZ1Q9NQZ3 744 aaKnown RBP15.1■□□□□ 0.01
LRCH3-208ENST00000443727 RABL2AQ9UBK7 228 aaPredicted RBP15.1■□□□□ 0.01
LRCH3-208ENST00000443727 RABL2BQ9UNT1 228 aa15.1■□□□□ 0.01
LRCH3-208ENST00000443727 C14orf166Q9Y224 244 aaKnown RBP15.1■□□□□ 0.01
LRCH3-208ENST00000443727 NDUFA4O00483 81 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 IFNA17P01571 189 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 IGKV1-5P01602 117 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 CTSDP07339 412 aaPredicted RBP15.09■□□□□ 0.01
LRCH3-208ENST00000443727 C8orf88P0DMB2 117 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 LYL1P12980 280 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 FAAP20Q6NZ36 180 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 SLC35G3Q8N808 338 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 ISOC1Q96CN7 298 aa15.09■□□□□ 0.01
LRCH3-208ENST00000443727 RRNAD1Q96FB5 475 aaKnown RBP15.09■□□□□ 0.01
LRCH3-208ENST00000443727 TRAV25A0A0B4J276 109 aa15.08■□□□□ 0
LRCH3-208ENST00000443727 NUPL2O15504 423 aaKnown RBP15.08■□□□□ 0
LRCH3-208ENST00000443727 B3GALNT1O75752 331 aa15.08■□□□□ 0
LRCH3-208ENST00000443727 SNCAP37840 140 aa15.08■□□□□ 0
LRCH3-208ENST00000443727 MFAP4P55083 255 aa15.08■□□□□ 0
LRCH3-208ENST00000443727 PINX1Q96BK5 328 aaKnown RBP15.08■□□□□ 0
LRCH3-208ENST00000443727 IGHV3OR16-8A0A075B7F1 116 aa15.07■□□□□ 0
LRCH3-208ENST00000443727 A0A0B4J293 547 aa15.07■□□□□ 0
LRCH3-208ENST00000443727 TEX13DA0A0J9YY54 714 aaPredicted RBP15.07■□□□□ 0
LRCH3-208ENST00000443727 CTDSPLO15194 276 aa15.07■□□□□ 0
LRCH3-208ENST00000443727 YIF1AO95070 293 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms