RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 C18orf32Q8TCD1 76 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 METRNQ9UJH8 293 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 IGHV2-70DA0A0C4DH43 119 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 HLA-DQA1P01909 254 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 USF1P22415 310 aaPredicted RBP16.72■□□□□ 0.27
SHOX2-203ENST00000441443 TNFSF4P23510 183 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 IBA57Q5T440 356 aaKnown RBP16.72■□□□□ 0.27
SHOX2-203ENST00000441443 TEPPQ6URK8 271 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 GCNT2Q8N0V5 402 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 FAM216AQ8WUB2 273 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 FAM122AQ96E09 287 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 ICE1Q9Y2F5 2266 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 IGFBP2P18065 325 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 MORN2Q502X0 79 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 EBLN2Q6P2I7 272 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 OR4F17Q8NGA8 305 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 FAM168AQ92567 244 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 IGLC7A0M8Q6 106 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 M0R296 226 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 ABI3Q9P2A4 366 aa16.72■□□□□ 0.27
SHOX2-203ENST00000441443 HSBP1O75506 76 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 OR10J4P0C629 311 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 CD59P13987 128 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 ZPBPQ9BS86 351 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 HES4Q9HCC6 221 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 OSTCQ9NRP0 149 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 TECRQ9NZ01 308 aaKnown RBP16.71■□□□□ 0.27
SHOX2-203ENST00000441443 IL19Q9UHD0 177 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 REG1AP05451 166 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 DUTP33316 252 aaKnown RBP16.71■□□□□ 0.27
SHOX2-203ENST00000441443 SLC35E4Q6ICL7 350 aa16.71■□□□□ 0.27
SHOX2-203ENST00000441443 TRAV9-2A0A087WT02 112 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 GPR12P47775 334 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 TMPRSS3P57727 454 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 PMCHL1Q16048 86 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 HES3Q5TGS1 186 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 GP6Q9HCN6 339 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 IGHV1-69-2A0A0G2JMI3 117 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 CBY3A6NI87 242 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 M0R2Z0 102 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 AREGP15514 252 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 SELENOVP59797 346 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 KIR3DL3Q8N743 410 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 OTOGLQ3ZCN5 2332 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 FAM181BA6NEQ2 426 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 CDX4O14627 284 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-203ENST00000441443 GATA2P23769 480 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-203ENST00000441443 GPR6P46095 362 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-203ENST00000441443 RPL39P5Q59GN2 51 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 ZNF766Q5HY98 468 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 WDR31Q8NA23 367 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 ZNF331Q9NQX6 463 aaPredicted RBP16.7■□□□□ 0.26
SHOX2-203ENST00000441443 TCF19Q9Y242 345 aa16.7■□□□□ 0.26
SHOX2-203ENST00000441443 ZFHX2Q9C0A1 2572 aaPredicted RBP16.69■□□□□ 0.26
SHOX2-203ENST00000441443 M0R1X1 148 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 OR7C2O60412 319 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 EDDM3AQ14507 147 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 SPATA12Q7Z6I5 190 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 IGLV2-8P01709 118 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 MEOX1P50221 254 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 RNASEKQ6P5S7 137 aaKnown RBP16.69■□□□□ 0.26
SHOX2-203ENST00000441443 SPACA3Q8IXA5 215 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 NEUROG1Q92886 237 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 CLCF1Q9UBD9 225 aa16.69■□□□□ 0.26
SHOX2-203ENST00000441443 SMIM27A0A1W2PRY6 76 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 GGTLC3B5MD39 225 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 ALKBH2Q6NS38 261 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 FAM214BQ7L5A3 538 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 OR5B3Q8NH48 314 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 HINT2Q9BX68 163 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 OBP2BQ9NPH6 170 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 ISLRO14498 428 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 RPL8P62917 257 aaKnown RBP16.68■□□□□ 0.26
SHOX2-203ENST00000441443 MUC15Q8N387 334 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 LINC00479Q96M42 142 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 SPRY4Q9C004 299 aa16.68■□□□□ 0.26
SHOX2-203ENST00000441443 MYOD1P15172 320 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 ERVK-16P61578 105 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 COX19Q49B96 90 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 MOB3BQ86TA1 216 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 SLC24A4Q8NFF2 622 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 OR2D3Q8NGH3 330 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 SSBP4Q9BWG4 385 aaPredicted RBP16.67■□□□□ 0.26
SHOX2-203ENST00000441443 TMEM140Q9NV12 185 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 ZFHX4Q86UP3 3567 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 MPV17L2Q567V2 206 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 SLC25A40Q8TBP6 338 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 ZNF503Q96F45 646 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 VPS25Q9BRG1 176 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 PLEKHA3Q9HB20 300 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 CLEC5AQ9NY25 188 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 MGAQ8IWI9 3026 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 SP1P08047 785 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 RAB31Q13636 194 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 LDLRAD2Q5SZI1 272 aa16.67■□□□□ 0.26
SHOX2-203ENST00000441443 H0YJW9 148 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 NPY1RP25929 384 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 MFAP2P55001 183 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 AARDQ4LEZ3 155 aa16.66■□□□□ 0.26
SHOX2-203ENST00000441443 GDF5OSQ5U4N7 250 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms