RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 APOC4P55056 127 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 TNFRSF9Q07011 255 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 Q56UQ5 140 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 TMEM69Q5SWH9 247 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 Q6ZWC4 215 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 OR5B3Q8NH48 314 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 TP53TG1Q9Y2A0 90 aa13.42□□□□□ -0.26
GTF3A-204ENST00000438571 GPR31O00270 319 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 BMI1P35226 326 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 HRH1P35367 487 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 SPSB3Q6PJ21 355 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 HSD17B13Q7Z5P4 300 aaPredicted RBP13.41□□□□□ -0.26
GTF3A-204ENST00000438571 LYSMD2Q8IV50 215 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 S100A16Q96FQ6 103 aaKnown RBP13.41□□□□□ -0.26
GTF3A-204ENST00000438571 RNF2Q99496 336 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 VPS13DQ5THJ4 4388 aa13.41□□□□□ -0.26
GTF3A-204ENST00000438571 C15orf61A6NNL5 157 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 CYB5BO43169 146 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 EIF4EP06730 217 aaKnown RBP13.4□□□□□ -0.26
GTF3A-204ENST00000438571 CTSGP08311 255 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 HLA-DMAP28067 261 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 RNF183Q96D59 192 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 TMEM14BQ9NUH8 114 aa13.4□□□□□ -0.26
GTF3A-204ENST00000438571 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 IGHV3OR16-13A0A075B7E8 117 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 IGHV3-74A0A0B4J1X5 117 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 K7EMT4 169 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 SNAPC5O75971 98 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 TFPI2P48307 235 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 TAS2R46P59540 309 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 CEMP1Q6PRD7 247 aaPredicted RBP13.39□□□□□ -0.27
GTF3A-204ENST00000438571 YIPF6Q96EC8 236 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 MAP6D1Q9H9H5 199 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 SMPXQ9UHP9 88 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
GTF3A-204ENST00000438571 KIR2DL5BA0A0G2JN68 375 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 KIR2DL5BA0A0G2JPC4 375 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 IGHV7-4-1A0A0J9YVY3 117 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 OR4C46A6NHA9 309 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 C15orf62A8K5M9 175 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 I3L2K1 104 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 CHEK1O14757 476 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 TBC1D26Q86UD7 250 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 KIR2DL5AQ8N109 375 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 STPG3Q8N7X2 389 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 TSPAN14Q8NG11 270 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 OR6F1Q8NGZ6 308 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 KIR2DL5BQ8NHK3 375 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 SLC25A46Q96AG3 418 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
GTF3A-204ENST00000438571 UBE2CO00762 179 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 TMEM127O75204 238 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 PRSS3P35030 304 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 SPINK9Q5DT21 86 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 CADM3Q8N126 398 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 RPP25LQ8N5L8 163 aaKnown RBP13.37□□□□□ -0.27
GTF3A-204ENST00000438571 OR1P1Q8NH06 330 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 GPX8Q8TED1 209 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 GALNT14Q96FL9 552 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 TMEM56Q96MV1 263 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
GTF3A-204ENST00000438571 MT-CO2P00403 227 aa13.36□□□□□ -0.27
GTF3A-204ENST00000438571 CROCCP3Q8IVE0 287 aa13.36□□□□□ -0.27
GTF3A-204ENST00000438571 GBGT1Q8N5D6 347 aa13.36□□□□□ -0.27
GTF3A-204ENST00000438571 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
GTF3A-204ENST00000438571 OR10C1Q96KK4 312 aa13.36□□□□□ -0.27
GTF3A-204ENST00000438571 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
GTF3A-204ENST00000438571 DEDDO75618 318 aa13.35□□□□□ -0.27
GTF3A-204ENST00000438571 YIF1AO95070 293 aa13.35□□□□□ -0.27
GTF3A-204ENST00000438571 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
GTF3A-204ENST00000438571 SNX29P2Q8IUI4 249 aa13.35□□□□□ -0.27
GTF3A-204ENST00000438571 PINX1Q96BK5 328 aaKnown RBP13.35□□□□□ -0.27
GTF3A-204ENST00000438571 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
GTF3A-204ENST00000438571 COMMD3Q9UBI1 195 aa13.35□□□□□ -0.27
GTF3A-204ENST00000438571 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-204ENST00000438571 MFAP4P55083 255 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 TSPAN5P62079 268 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 NCS1P62166 190 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 PRCDQ00LT1 54 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 RELQ04864 619 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-204ENST00000438571 RNASE12Q5GAN4 147 aaKnown RBP13.34□□□□□ -0.27
GTF3A-204ENST00000438571 LILRB2Q8N423 598 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 ZNF114Q8NC26 417 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 PHLDA1Q8WV24 401 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-204ENST00000438571 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
GTF3A-204ENST00000438571 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms