RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GNB1P62873 340 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 C17orf58Q2M2W7 97 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 MIC13Q5XKP0 118 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 OR4A16Q8NH70 328 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 SNRNP40Q96DI7 357 aaKnown RBP8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 YPEL2Q96QA6 119 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 WNT10AQ9GZT5 417 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 ZNF586Q9NXT0 402 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 ZNRD1Q9P1U0 126 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 GOSR1O95249 250 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 NTF3P20783 257 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 CT45A1Q5HYN5 189 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 DEFB108BQ8NET1 73 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 SVIPQ8NHG7 77 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 CT45A3Q8NHU0 189 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 IMMP2LQ96T52 175 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 MGST2Q99735 147 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 CALYQ9NYX4 217 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
CLSTN1-203ENST00000435891 PKDREJQ9NTG1 2253 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 MBD3L4A6NDZ8 208 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 MBD3L3A6NE82 208 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 MBD3L5A6NJ08 208 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 K7ERU9 68 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 RELNP78509 3460 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 F2RL2O00254 374 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 LHBP01229 141 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 CGB3P0DN86 165 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 CGB7P0DN87 165 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 CR1LQ2VPA4 569 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 SSMEM1Q8WWF3 244 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 DDB2Q92466 427 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 SAA2-SAA4A0A096LPE2 208 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 C17orf112F2Z3M2 114 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 MMP23AO75900 390 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 NDUFB4O95168 129 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 NDUFB8O95169 186 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 SAA2P0DJI9 122 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 PSG1P11464 419 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 CRISP2P16562 243 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 Q6ZWC4 215 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 S1PR3Q99500 378 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
CLSTN1-203ENST00000435891 TRBV20OR9-2A0A075B6H5 130 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 AMTP48728 403 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 TPTE2P1Q5T6R2 138 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 TRAT1Q6PIZ9 186 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 CLUHP3Q96NS8 147 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 GGTLC1Q9BX51 225 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 CST9LQ9H4G1 147 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 TCF19Q9Y242 345 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 ACACAQ13085 2346 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 ARL14EPLP0DKL9 152 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 CFHR2P36980 270 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 CISD2Q8N5K1 135 aaKnown RBP8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 ZNF318Q5VUA4 2279 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 LOC105371242A0A075B767 164 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 C1QTNF9P0C862 333 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 TNFSF4P23510 183 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 FAM27E3Q08E93 113 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 SPATA31B1PQ5VZV4 182 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 PXMP4Q9Y6I8 212 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
CLSTN1-203ENST00000435891 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 SPINK4O60575 86 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 SERF1AO75920 110 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 OR4B1Q8NGF8 309 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 SEPSECSQ9HD40 501 aaKnown RBP8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 TACC2O95359 2948 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 A0A1W2PN81 502 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 A0A1W2PPV4 95 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.044e-6■■□□□ 12.8
CLSTN1-203ENST00000435891 GLRXP35754 106 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 ERVK-16P61578 105 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 FAM216BQ8N7L0 139 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 GCM1Q9NP62 436 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 CEACAM4O75871 244 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 ACTL10Q5JWF8 245 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 TIMM23BQ5SRD1 257 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 MOB3BQ86TA1 216 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 CCL13Q99616 98 aa8.54□□□□□ -1.04
CLSTN1-203ENST00000435891 TANC2Q9HCD6 1990 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 IL3RAP26951 378 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 ZCCHC24Q8N2G6 241 aaKnown RBP8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms