RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZNF57Q68EA5 555 aaPredicted RBP13.29□□□□□ -0.28
NUP50-208ENST00000430547 UBAC2Q8NBM4 344 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 TERB2Q8NHR7 220 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 BSCL2Q96G97 398 aaPredicted RBP13.29□□□□□ -0.28
NUP50-208ENST00000430547 DIRAS2Q96HU8 199 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 NEURL2Q9BR09 285 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
NUP50-208ENST00000430547 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 UFC1Q9Y3C8 167 aa13.29□□□□□ -0.28
NUP50-208ENST00000430547 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 C3orf85A0A1B0GTC6 90 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 DBX1A6NMT0 343 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 RPL5P46777 297 aaKnown RBP13.28□□□□□ -0.28
NUP50-208ENST00000430547 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 Q56UQ5 140 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 UXS1Q8NBZ7 420 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 DYNC2LI1Q8TCX1 351 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 SMIM4Q8WVI0 70 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 MARC2Q969Z3 335 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
NUP50-208ENST00000430547 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 C6orf62Q9GZU0 229 aaPredicted RBP13.28□□□□□ -0.28
NUP50-208ENST00000430547 PLEKHA3Q9HB20 300 aa13.28□□□□□ -0.28
NUP50-208ENST00000430547 ZNF785A8K8V0 405 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 DISC1C4P0D8 188 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 MFAP2P55001 183 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 ELLP55199 621 aaPredicted RBP13.27□□□□□ -0.29
NUP50-208ENST00000430547 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 TM4SF20Q53R12 229 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 UNQ9165/PRO28630Q6UXU0 137 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 SLC16A13Q7RTY0 426 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 OR13C8Q8NGS7 320 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 RNASE11Q8TAA1 199 aaKnown RBP13.27□□□□□ -0.29
NUP50-208ENST00000430547 MARCH1Q8TCQ1 289 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 SCARB1Q8WTV0 552 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 TP53RKQ96S44 253 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 ATP6V0BQ99437 205 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 SPATA25Q9BR10 227 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 PDCD10Q9BUL8 212 aa13.27□□□□□ -0.29
NUP50-208ENST00000430547 GAR1Q9NY12 217 aaKnown RBP13.27□□□□□ -0.29
NUP50-208ENST00000430547 C14orf166Q9Y224 244 aaKnown RBP13.27□□□□□ -0.29
NUP50-208ENST00000430547 HSPE1P61604 102 aaKnown RBP13.26□□□□□ -0.29
NUP50-208ENST00000430547 ERHP84090 104 aaKnown RBP13.26□□□□□ -0.29
NUP50-208ENST00000430547 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 TMEM61Q8N0U2 210 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
NUP50-208ENST00000430547 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
NUP50-208ENST00000430547 MLXQ9UH92 298 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 SELENOKQ9Y6D0 94 aa13.26□□□□□ -0.29
NUP50-208ENST00000430547 C3orf84H3BNL1 204 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 K7EIM0 57 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 CTDSPLO15194 276 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 B3GALNT1O75752 331 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 CTSDP07339 412 aaPredicted RBP13.25□□□□□ -0.29
NUP50-208ENST00000430547 CD7P09564 240 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 AKAIN1P0CW23 69 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 HAGHQ16775 308 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 ANKRD55Q3KP44 614 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 RBPMS2Q6ZRY4 209 aaKnown RBP13.25□□□□□ -0.29
NUP50-208ENST00000430547 SLC35G3Q8N808 338 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 TMEM190Q8WZ59 177 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
NUP50-208ENST00000430547 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
NUP50-208ENST00000430547 CEPT1Q9Y6K0 416 aa13.25□□□□□ -0.29
NUP50-208ENST00000430547 OR11H12B2RN74 326 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 NDUFA4O00483 81 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 SCAF4O95104 1147 aaKnown RBP13.24□□□□□ -0.29
NUP50-208ENST00000430547 IFNA17P01571 189 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 SNCAP37840 140 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 SP6Q3SY56 376 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 OR52B4Q8NGK2 314 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 ISOC1Q96CN7 298 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 C20orf24Q9BUV8 137 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
NUP50-208ENST00000430547 RSL24D1Q9UHA3 163 aaKnown RBP13.24□□□□□ -0.29
NUP50-208ENST00000430547 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 TEX13DA0A0J9YY54 714 aaPredicted RBP13.23□□□□□ -0.29
NUP50-208ENST00000430547 H3BMQ9 156 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 NUPL2O15504 423 aaKnown RBP13.23□□□□□ -0.29
NUP50-208ENST00000430547 MFAP4P55083 255 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 RELQ04864 619 aaPredicted RBP13.23□□□□□ -0.29
NUP50-208ENST00000430547 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
NUP50-208ENST00000430547 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 DEFB125Q8N687 156 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 OR4C16Q8NGL9 310 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
NUP50-208ENST00000430547 PRRT1Q99946 306 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
NUP50-208ENST00000430547 ENY2Q9NPA8 101 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms