RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PRB3Q04118 309 aaPredicted RBP6.71□□□□□ -1.34
HPS4-205ENST00000429411 WDR82Q6UXN9 313 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 ZNF295-AS1Q8N0V1 137 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 ITLN1Q8WWA0 313 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 MBD3L1Q8WWY6 194 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 CORO2AQ92828 525 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 MISP3Q96FF7 219 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 RNF2Q99496 336 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 ASCL2Q99929 193 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 DDA1Q9BW61 102 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 SRD5A3Q9H8P0 318 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 NAGKQ9UJ70 344 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 JMJD1CQ15652 2540 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 A0A1B0GW64 132 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 MT-CO2P00403 227 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 PLAUP00749 431 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 AMBPP02760 352 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 LINC00614P0C842 121 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 OR5I1Q13606 314 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 ASPHD1Q5U4P2 390 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 INO80CQ6PI98 192 aaPredicted RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 WFDC8Q8IUA0 241 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 OR10G8Q8NGN5 311 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 HARBI1Q96MB7 349 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 CCL13Q99616 98 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 ZNRD1Q9P1U0 126 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 PAM16Q9Y3D7 125 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 IGHV3-21A0A0B4J1V1 117 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 OR5G3P0C626 314 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 MRPS11P82912 194 aaKnown RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 GABRA6Q16445 453 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 Q6ZR03 302 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 TMEM183AQ8IXX5 376 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 C11orf1Q9H5F2 150 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 YAE1D1Q9NRH1 226 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 OR6C3Q9NZP0 311 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 MRPS18CQ9Y3D5 142 aaKnown RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 MKRN2OSH3BPM6 223 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 PAX1P15863 534 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 NPY1RP25929 384 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 SPATA31B1PQ5VZV4 182 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 TMEM14EPQ6UXP3 125 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 Q6ZS49 121 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 PRDM13Q9H4Q3 707 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 FKBP11Q9NYL4 201 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 ONECUT1Q9UBC0 465 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 HSPB7Q9UBY9 170 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 ABCA2Q9BZC7 2435 aa6.7□□□□□ -1.34
HPS4-205ENST00000429411 COL5A1P20908 1838 aaPredicted RBP6.7□□□□□ -1.34
HPS4-205ENST00000429411 RAB29O14966 203 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 IGLV2-14P01704 120 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 IL3RAP26951 378 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 GNB2P62879 340 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 SRSF2Q01130 221 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 ZNF146Q15072 292 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 Q6ZT83 130 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 DOLPP1Q86YN1 238 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 TMEM256Q8N2U0 113 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 TCF19Q9Y242 345 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 TRGV10A0A0A0MS01 117 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 SNURFLB1AK76 121 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 FAM90A26D6RGX4 464 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CD82P27701 267 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 TNFSF10P50591 281 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 RBX1P62877 108 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 RPL31P62899 125 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 PAX5Q02548 391 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 KRTAP27-1Q3LI81 207 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 VN1R17PQ8TDU5 208 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 BTF3L4Q96K17 158 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 SRSF8Q9BRL6 282 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 TBL2Q9Y4P3 447 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 K7EM74 188 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CGAP01215 116 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CRISP2P16562 243 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 KLF3P57682 345 aaPredicted RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 GNB1P62873 340 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 GAGE1Q13065 139 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 SLC35E4Q6ICL7 350 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 BHLHA15Q7RTS1 189 aaPredicted RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 MOB3BQ86TA1 216 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 OR8I2Q8N0Y5 310 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CISD2Q8N5K1 135 aaKnown RBP6.69□□□□□ -1.34
HPS4-205ENST00000429411 CD177Q8N6Q3 437 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CMTM2Q8TAZ6 248 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 CCL17Q92583 94 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 TBX15Q96SF7 602 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
HPS4-205ENST00000429411 IGHV3-72A0A0B4J1Y9 119 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TRAV1-1A0A0B4J248 108 aa6.68□□□□□ -1.34
HPS4-205ENST00000429411 TRAV17A0A0B4J275 112 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms