RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
GPC1-203ENST00000425056 TMEM14BQ9NUH8 114 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
GPC1-203ENST00000425056 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 ADMP35318 185 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 APOC4P55056 127 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 LSM3P62310 102 aaKnown RBP13.18□□□□□ -0.3
GPC1-203ENST00000425056 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 GPR107Q5VW38 600 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 LYSMD2Q8IV50 215 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 SLC25A46Q96AG3 418 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 TMEM56Q96MV1 263 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
GPC1-203ENST00000425056 DBX1A6NMT0 343 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 K7EMT4 169 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 GABARAPO95166 117 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 EIF4EP06730 217 aaKnown RBP13.17□□□□□ -0.3
GPC1-203ENST00000425056 LAMTOR1Q6IAA8 161 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 Q6ZWC4 215 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 GPX8Q8TED1 209 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 BCL7BQ9BQE9 202 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 C20orf24Q9BUV8 137 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
GPC1-203ENST00000425056 C15orf62A8K5M9 175 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 NOL3O60936 208 aaKnown RBP13.16□□□□□ -0.3
GPC1-203ENST00000425056 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 TMBIM6P55061 237 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 PHLDA2Q53GA4 152 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 Q56UQ5 140 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 LPCAT3Q6P1A2 487 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 CLVS1Q8IUQ0 354 aaPredicted RBP13.16□□□□□ -0.3
GPC1-203ENST00000425056 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
GPC1-203ENST00000425056 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 KIR2DL5BA0A0G2JN68 375 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 KIR2DL5BA0A0G2JPC4 375 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 OR4C46A6NHA9 309 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 UBE2CO00762 179 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 CTSGP08311 255 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 S100GP29377 79 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 BMI1P35226 326 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 TNFRSF9Q07011 255 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 DEFB135Q30KP9 77 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 KIR2DL5AQ8N109 375 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 SCPEP1Q9HB40 452 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 NDUFA13Q9P0J0 144 aa13.15□□□□□ -0.3
GPC1-203ENST00000425056 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 SMIM31A0A1B0GVY4 71 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 SPRY2O43597 315 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
GPC1-203ENST00000425056 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 APOA1P02647 267 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
GPC1-203ENST00000425056 RCVRNP35243 200 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 UCP3P55916 312 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 TSPAN5P62079 268 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 RELQ04864 619 aaPredicted RBP13.14□□□□□ -0.31
GPC1-203ENST00000425056 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 LINC00476Q8WZB0 136 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
GPC1-203ENST00000425056 I3L2K1 104 aa13.13□□□□□ -0.31
GPC1-203ENST00000425056 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
GPC1-203ENST00000425056 CTSDP07339 412 aaPredicted RBP13.13□□□□□ -0.31
GPC1-203ENST00000425056 EWSR1Q01844 656 aaKnown RBP eCLIP13.13□□□□□ -0.31
GPC1-203ENST00000425056 CTF1Q16619 201 aa13.13□□□□□ -0.31
GPC1-203ENST00000425056 OR10C1Q96KK4 312 aa13.13□□□□□ -0.31
GPC1-203ENST00000425056 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
GPC1-203ENST00000425056 COMMD3Q9UBI1 195 aa13.13□□□□□ -0.31
GPC1-203ENST00000425056 SMPXQ9UHP9 88 aa13.13□□□□□ -0.31
GPC1-203ENST00000425056 IGHV7-4-1A0A0J9YVY3 117 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 CXorf65A6NEN9 183 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 NUPR2A6NF83 97 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
GPC1-203ENST00000425056 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
GPC1-203ENST00000425056 NCS1P62166 190 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 H2BFWTQ7Z2G1 175 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 SNX29P2Q8IUI4 249 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 STPG3Q8N7X2 389 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 RNF183Q96D59 192 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 RNF2Q99496 336 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 TXN2Q99757 166 aa13.12□□□□□ -0.31
GPC1-203ENST00000425056 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 CHEK1O14757 476 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 MFAP4P55083 255 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 VBP1P61758 197 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 PMS2P11Q13670 270 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 OR4A16Q8NH70 328 aa13.11□□□□□ -0.31
GPC1-203ENST00000425056 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms