RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TMEM14BQ9NUH8 114 aa19.03■□□□□ 0.64
VEGFA-208ENST00000417285 MTFP1Q9UDX5 166 aa19.03■□□□□ 0.64
VEGFA-208ENST00000417285 MLXQ9UH92 298 aa19.03■□□□□ 0.64
VEGFA-208ENST00000417285 CD3DP04234 171 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 H2BFWTQ7Z2G1 175 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 OR52B4Q8NGK2 314 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 OR4A16Q8NH70 328 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 SEC22AQ96IW7 307 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 ABHD1Q96SE0 405 aa19.02■□□□□ 0.64
VEGFA-208ENST00000417285 RGS5O15539 181 aa19.01■□□□□ 0.63
VEGFA-208ENST00000417285 TGOLN2O43493 480 aa19.01■□□□□ 0.63
VEGFA-208ENST00000417285 RND3P61587 244 aa19.01■□□□□ 0.63
VEGFA-208ENST00000417285 UNQ9165/PRO28630Q6UXU0 137 aa19.01■□□□□ 0.63
VEGFA-208ENST00000417285 RBPMS2Q6ZRY4 209 aaKnown RBP19.01■□□□□ 0.63
VEGFA-208ENST00000417285 ZNF436Q9C0F3 470 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-208ENST00000417285 DYNC2H1Q8NCM8 4307 aaKnown RBP19.01■□□□□ 0.63
VEGFA-208ENST00000417285 SPSB3Q6PJ21 355 aa19■□□□□ 0.63
VEGFA-208ENST00000417285 LHFPL1Q86WI0 220 aa19■□□□□ 0.63
VEGFA-208ENST00000417285 MRGPRFQ96AM1 343 aa19■□□□□ 0.63
VEGFA-208ENST00000417285 BSCL2Q96G97 398 aaPredicted RBP19■□□□□ 0.63
VEGFA-208ENST00000417285 LCE6AA0A183 80 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 OR2T8A6NH00 312 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 DBX1A6NMT0 343 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 IGKV1-39P01597 117 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 IGKV1D-39P04432 117 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 MFAP2P55001 183 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 TAS2R19P59542 299 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 BTNL8Q6UX41 500 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 TMEM229BQ8NBD8 167 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 C21orf62Q9NYP8 219 aa18.99■□□□□ 0.63
VEGFA-208ENST00000417285 IGHV3-35A0A0C4DH35 117 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 SCAF4O95104 1147 aaKnown RBP18.98■□□□□ 0.63
VEGFA-208ENST00000417285 PIGPP57054 158 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 SPCS2Q15005 226 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 WFDC10AQ9H1F0 79 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 MIXL1Q9H2W2 232 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 C5orf66Q9H5L9 145 aa18.98■□□□□ 0.63
VEGFA-208ENST00000417285 GABARAPH6UMI1 98 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 PI3P19957 117 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 MRPS10P82664 201 aaKnown RBP18.97■□□□□ 0.63
VEGFA-208ENST00000417285 CLVS1Q8IUQ0 354 aaPredicted RBP18.97■□□□□ 0.63
VEGFA-208ENST00000417285 OR1P1Q8NH06 330 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 SCARB1Q8WTV0 552 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 RAB2BQ8WUD1 216 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 RETNQ9HD89 108 aa18.97■□□□□ 0.63
VEGFA-208ENST00000417285 GAR1Q9NY12 217 aaKnown RBP18.97■□□□□ 0.63
VEGFA-208ENST00000417285 IGHV3-21A0A0B4J1V1 117 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 NDUFA4O00483 81 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 RAB3DO95716 219 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 CD74P04233 296 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 PPP5CP53041 499 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 PRCDQ00LT1 54 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 SSBP1Q04837 148 aaKnown RBP18.96■□□□□ 0.63
VEGFA-208ENST00000417285 TERB2Q8NHR7 220 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 ZFAND1Q8TCF1 268 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 TMEM190Q8WZ59 177 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 DAZ1Q9NQZ3 744 aaKnown RBP18.96■□□□□ 0.63
VEGFA-208ENST00000417285 COPZ2Q9P299 210 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 SELENOKQ9Y6D0 94 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 CSMD3Q7Z407 3707 aa18.96■□□□□ 0.63
VEGFA-208ENST00000417285 K7EIM0 57 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 ATG12O94817 140 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 HSPE1P61604 102 aaKnown RBP18.95■□□□□ 0.62
VEGFA-208ENST00000417285 SCGB2B2Q4G0G5 96 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 Q56UQ5 140 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 LAMTOR1Q6IAA8 161 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 STEAP1BQ6NZ63 245 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 OR2C3Q8N628 320 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 CCDC71LQ8N9Z2 235 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 UBAC2Q8NBM4 344 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 OR4D10Q8NGI6 311 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 BCL7BQ9BQE9 202 aa18.95■□□□□ 0.62
VEGFA-208ENST00000417285 K7EMT4 169 aa18.94■□□□□ 0.62
VEGFA-208ENST00000417285 CTDSP2O14595 271 aa18.94■□□□□ 0.62
VEGFA-208ENST00000417285 TP53RKQ96S44 253 aa18.94■□□□□ 0.62
VEGFA-208ENST00000417285 SPAG8Q99932 426 aaPredicted RBP18.94■□□□□ 0.62
VEGFA-208ENST00000417285 FAM110AQ9BQ89 295 aa18.94■□□□□ 0.62
VEGFA-208ENST00000417285 GGTLC1Q9BX51 225 aa18.94■□□□□ 0.62
VEGFA-208ENST00000417285 LOC102724200A0A096LPH7 203 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-208ENST00000417285 C3orf85A0A1B0GTC6 90 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 AKR1C2P52895 323 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 TMBIM6P55061 237 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 ERHP84090 104 aaKnown RBP18.93■□□□□ 0.62
VEGFA-208ENST00000417285 MEF2DQ14814 521 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 ZNF114Q8NC26 417 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 MISP3Q96FF7 219 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 CHRDL1Q9BU40 450 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 CCDC59Q9P031 241 aaKnown RBP18.93■□□□□ 0.62
VEGFA-208ENST00000417285 RABL2AQ9UBK7 228 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-208ENST00000417285 RABL2BQ9UNT1 228 aa18.93■□□□□ 0.62
VEGFA-208ENST00000417285 F8W735 103 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-208ENST00000417285 TSPAN4O14817 238 aa18.92■□□□□ 0.62
VEGFA-208ENST00000417285 TRIM16LQ309B1 348 aa18.92■□□□□ 0.62
VEGFA-208ENST00000417285 OR13C8Q8NGS7 320 aa18.92■□□□□ 0.62
VEGFA-208ENST00000417285 B3GALNT1O75752 331 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 IGKV1-5P01602 117 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 IL18Q14116 193 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 DYNC2LI1Q8TCX1 351 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 SMIM4Q8WVI0 70 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 DIRAS2Q96HU8 199 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms