RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CMSS1	Q9BQ75	279 aa	Known RBP	5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	NIPSNAP3B	Q9BS92	247 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CABLES2	Q9BTV7	478 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RNF167	Q9H6Y7	350 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	C21orf62	Q9NYP8	219 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	TNFRSF18	Q9Y5U5	241 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	DNAH8	Q96JB1	4490 aa		5.99	□□□□□ -1.45
NIF3L1-206	ENST00000416651	TRAV14DV4	A0A0A6YYC5	116 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651		K7EQG2	157 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ST8SIA3	O43173	380 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	DNAH10OS	P0CZ25	163 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	HLA-G	P17693	338 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	NAT1	P18440	290 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CEL	P19835	753 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RPL8	P62917	257 aa	Known RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	MRPL28	Q13084	256 aa	Known RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	TPBG	Q13641	420 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	P2RY14	Q15391	338 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CCDC58	Q4VC31	144 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651		Q56UQ5	140 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	KCTD9	Q7L273	389 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	LRRTM1	Q86UE6	522 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	OR4A4P	Q8NGN8	299 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	VN1R17P	Q8TDU5	208 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	DGCR14	Q96DF8	476 aa	Known RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	FAM210B	Q96KR6	192 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	GFI1	Q99684	422 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	VSIR	Q9H7M9	311 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CKLF	Q9UBR5	152 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ELF5	Q9UKW6	265 aa	Predicted RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	POMP	Q9Y244	141 aa		5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RBM7	Q9Y580	266 aa	Known RBP	5.98	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	NUDT3	O95989	172 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	DHFR	P00374	187 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	OR13C7	P0DN81	318 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	BTF3	P20290	206 aa	Known RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	C1orf100	Q5SVJ3	147 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	LIPK	Q5VXJ0	399 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	MEDAG	Q5VYS4	303 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ZNF773	Q6PK81	442 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ZNF705A	Q6ZN79	300 aa	Predicted RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CDH26	Q8IXH8	852 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	FAM89B	Q8N5H3	189 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ZNF485	Q8NCK3	441 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	STXBP6	Q8NFX7	210 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	OR10J5	Q8NHC4	309 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	TRUB1	Q8WWH5	349 aa	Known RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	MRPL48	Q96GC5	212 aa	Known RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ADTRP	Q96IZ2	230 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	CMTM3	Q96MX0	182 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RAB40C	Q96S21	281 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	SLC29A1	Q99808	456 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RIMS4	Q9H426	269 aa	Predicted RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651		Q9H8V8	135 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	C12orf4	Q9NQ89	552 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	BABAM2	Q9NXR7	383 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	SPATA2	Q9UM82	520 aa		5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	RBMX2	Q9Y388	322 aa	Known RBP	5.97	□□□□□ -1.45
NIF3L1-206	ENST00000416651	LRP2	P98164	4655 aa		5.96	□□□□□ -1.45
NIF3L1-206	ENST00000416651	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	ZNF561-AS1	K7EIQ3	104 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	CREBL2	O60519	120 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	FCGR3A	P08637	254 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	ZNF705D	P0CH99	300 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	ZNF705B	P0CI00	300 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	NFYA	P23511	347 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	FAM3B	P58499	235 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	PAFAH1B2	P68402	229 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	TIMM50	Q3ZCQ8	353 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	YIF1B	Q5BJH7	314 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	GDF5OS	Q5U4N7	250 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	SPSB3	Q6PJ21	355 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	TOMM20L	Q6UXN7	152 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	CBR4	Q8N4T8	237 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	GDPD1	Q8N9F7	314 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	RHOXF1	Q8NHV9	184 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	UQCC2	Q9BRT2	126 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	FGF20	Q9NP95	211 aa	Predicted RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	MRPS18A	Q9NVS2	196 aa	Known RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	ZNF586	Q9NXT0	402 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	ARL2BP	Q9Y2Y0	163 aa		5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.96	□□□□□ -1.46
NIF3L1-206	ENST00000416651		A0A1B0GU03	582 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	UPK2	O00526	184 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	TNFSF12	O43508	249 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	DCTN3	O75935	186 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	IGKV3-20	P01619	116 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	SERPINE2	P07093	398 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	CLDN12	P56749	244 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	LINC00315	P59091	139 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	SUMO1	P63165	101 aa	Known RBP	5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	FCN2	Q15485	313 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	TMEM41B	Q5BJD5	291 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	SSX7	Q7RTT5	188 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	DCANP1	Q8TF63	244 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	TCTEX1D2	Q8WW35	142 aa		5.95	□□□□□ -1.46
NIF3L1-206	ENST00000416651	HRASLS	Q9HDD0	168 aa		5.95	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms