RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 MYOZ3Q8TDC0 251 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 ZNF137PP52743 207 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 CMC4P56277 68 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-205ENST00000414879 GUCA2BQ16661 112 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 Q6ZN92 141 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 C12orf57Q99622 126 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 KLHDC3Q9BQ90 382 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 GSX1Q9H4S2 264 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-205ENST00000414879 GNLYP22749 145 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 IER3P46695 156 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 MRPL54Q6P161 138 aaKnown RBP9.94□□□□□ -0.82
PTPRF-205ENST00000414879 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 OR4D5Q8NGN0 318 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 RRHO14718 337 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 WNT2P09544 360 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 OR9G9P0C7N8 305 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 ADIPOQQ15848 244 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 Q6P435 159 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
PTPRF-205ENST00000414879 A1L4Q6 167 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 CEACAM4O75871 244 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
PTPRF-205ENST00000414879 WNT10AQ9GZT5 417 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 MOB4Q9Y3A3 225 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 DPRXA6NFQ7 191 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 C1QL1O75973 258 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 PRSS1P07477 247 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 LMO1P25800 156 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 PLAURQ03405 335 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 CD69Q07108 199 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 EFNB3Q15768 340 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 SLC25A48Q6ZT89 311 aaKnown RBP9.93□□□□□ -0.82
PTPRF-205ENST00000414879 PRO3102Q9H379 93 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 IGHV2-26A0A0B4J1V2 119 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 REG1AP05451 166 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 CFHR2P36980 270 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 LHFPL5Q8TAF8 219 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 FMC1Q96HJ9 113 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 F8VVB4 439 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 F8VWA3 439 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
PTPRF-205ENST00000414879 C2orf83Q53S99 150 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 OR1P1Q8NH06 330 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 TMEM167AQ8TBQ9 72 aa9.93□□□□□ -0.82
PTPRF-205ENST00000414879 GPR179Q6PRD1 2367 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 PF4P02776 101 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 SMIM6P0DI80 62 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 CD99P14209 185 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 PTTG1IPP53801 180 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 SH3BGRL3Q9H299 93 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 M0R143 59 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 PHOX2AO14813 284 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 CX3CL1P78423 397 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 TMEM200BQ69YZ2 307 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 SSC4DQ8WTU2 575 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 PARLQ9H300 379 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
PTPRF-205ENST00000414879 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 J3QR89 54 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 IGLV1-44P01699 117 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 AMY1AP04745 511 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CD55P08174 381 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 PAX1P15863 534 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 AGAP20933 346 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 ANOS1P23352 680 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 RELBQ01201 579 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 TPTE2P1Q5T6R2 138 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CD177Q8N6Q3 437 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 GAFA1Q96PS6 74 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 ZNF880Q6PDB4 577 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 WDR83OSQ9Y284 106 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CARHSP1Q9Y2V2 147 aaKnown RBP9.91□□□□□ -0.82
PTPRF-205ENST00000414879 TCRBV4S1A1TA0A5B7 111 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 GPX1P07203 203 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CRYBB3P26998 211 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 TRAV14DV4A0A0A6YYC5 116 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 MPTX1A8MV57 137 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 MGPP08493 103 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 TWIST1Q15672 202 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 LY6G6FQ5SQ64 297 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 CIARTQ8N365 385 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-205ENST00000414879 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 RNF126Q9BV68 326 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-205ENST00000414879 PHLDA3Q9Y5J5 127 aa9.91□□□□□ -0.82
PTPRF-205ENST00000414879 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
PTPRF-205ENST00000414879 PSPNO60542 156 aa9.9□□□□□ -0.82
PTPRF-205ENST00000414879 IGFBP2P18065 325 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms