RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ACTL10Q5JWF8 245 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 DEFB108BQ8NET1 73 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
GCFC2-202ENST00000409857 CR1P17927 2039 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 IGHV4-61A0A0C4DH41 118 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 HAND1O96004 215 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 UBE2G2P60604 165 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 NEIL1Q96FI4 390 aaPredicted RBP13.77□□□□□ -0.21
GCFC2-202ENST00000409857 DERL1Q9BUN8 251 aa13.77□□□□□ -0.21
GCFC2-202ENST00000409857 PATZ1Q9HBE1 687 aaKnown RBP13.77□□□□□ -0.21
GCFC2-202ENST00000409857 YLPM1P49750 1951 aaKnown RBP13.76□□□□□ -0.21
GCFC2-202ENST00000409857 IGKV1D-17A0A075B6S4 117 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 PGPEP1LA6NFU8 196 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 C11orf94C9JXX5 98 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 MSMO1Q15800 293 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 GALMQ96C23 342 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 SDSLQ96GA7 329 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 C2orf88Q9BSF0 95 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 MANBALQ9NQG1 85 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 VPS13CQ709C8 3753 aa13.76□□□□□ -0.21
GCFC2-202ENST00000409857 IGHV3-43A0A0B4J1X8 118 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 A0A1B0GUS0 222 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 IGHV3-43DP0DP04 118 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 RAB4BP61018 213 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 LMO4P61968 165 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 EIF4EBP1Q13541 118 aaPredicted RBP13.75□□□□□ -0.21
GCFC2-202ENST00000409857 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ZNF788Q6ZQV5 615 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ARL6IP6Q8N6S5 226 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 KCNIP1Q9NZI2 227 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ITPR3Q14573 2671 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 NKX6-3A6NJ46 265 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 RNF223E7ERA6 249 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
GCFC2-202ENST00000409857 HBZP02008 142 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ATP5G3P48201 142 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 USF2Q15853 346 aaPredicted RBP13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 MRGPRDQ8TDS7 321 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 ANAPC16Q96DE5 110 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 C1orf159Q96HA4 380 aa13.75□□□□□ -0.21
GCFC2-202ENST00000409857 LINC00473A8K010 186 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 MBP02144 154 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 PRDX2P32119 198 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 LBHQ53QV2 105 aaPredicted RBP13.74□□□□□ -0.21
GCFC2-202ENST00000409857 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 TCAPO15273 167 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 GNB1P62873 340 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 ZNF114Q8NC26 417 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 RFESDQ8TAC1 157 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 GAFA1Q96PS6 74 aa13.74□□□□□ -0.21
GCFC2-202ENST00000409857 IL3RAP26951 378 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 SSTR5P35346 364 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 CDC34P49427 236 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-202ENST00000409857 CST9LP1Q5W188 147 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 LYPD2Q6UXB3 125 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 H2BFWTQ7Z2G1 175 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
GCFC2-202ENST00000409857 Q8N7P7 452 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 OR8B3Q8NGG8 313 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 OR8B2Q96RD0 313 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 OTOGQ6ZRI0 2925 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 TMEM30CPA0ZSE6 113 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 C21orf62-AS1Q17RA5 79 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 LINC01551Q86U37 167 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 CCL13Q99616 98 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 FAM234AQ9H0X4 552 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
GCFC2-202ENST00000409857 TMPRSS2O15393 492 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 NDUFB4O95168 129 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 GCGP01275 180 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 SRP14P37108 136 aaKnown RBP13.72□□□□□ -0.21
GCFC2-202ENST00000409857 GABRA2P47869 451 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 EDDM3BP56851 147 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 TGIF2LXQ8IUE1 241 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 COQ2Q96H96 371 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 QTRT1Q9BXR0 403 aaKnown RBP13.72□□□□□ -0.21
GCFC2-202ENST00000409857 CTSZQ9UBR2 303 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 LTC4SQ16873 150 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 ZNF841Q6ZN19 808 aa13.72□□□□□ -0.21
GCFC2-202ENST00000409857 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
GCFC2-202ENST00000409857 A0A0U1RQK1 487 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 ZNF320A2RRD8 509 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 C15orf62A8K5M9 175 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 EREGO14944 169 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 NUPR1O60356 82 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
GCFC2-202ENST00000409857 CATR1Q13166 79 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 VWC2Q2TAL6 325 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 TMEM256Q8N2U0 113 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 TMEM18Q96B42 140 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 RAB29O14966 203 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 VENTXO95231 258 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 TYMSP04818 313 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms