RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 BUB1B-PAK6H3BSN5 160 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CST7O76096 145 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CD24P25063 80 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 FCER1GP30273 86 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CDC34P49427 236 aaPredicted RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 LRRC75AQ8NAA5 344 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 MRPL30Q8TCC3 161 aaKnown RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 GAFA1Q96PS6 74 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 RTN4RQ9BZR6 473 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 MPDU1O75352 247 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 NDUFB8O95169 186 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
SH3D19-203ENST00000409598 H2BFSP57053 126 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 C5orf64Q2M2E5 130 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF329Q86UD4 541 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 TRAV9-2A0A087WT02 112 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 FGF16O43320 207 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 RPL15P61313 204 aaKnown RBP6.18□□□□□ -1.42
SH3D19-203ENST00000409598 RPL39P5Q59GN2 51 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 TMEM116Q8NCL8 245 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 NOL4LQ96MY1 436 aaPredicted RBP6.18□□□□□ -1.42
SH3D19-203ENST00000409598 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 TRBV5-5A0A0J9YX44 114 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 C20orf202A1L168 122 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 FAM90A26D6RGX4 464 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 AMBPP02760 352 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 UNC119Q13432 240 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 SPANXN1Q5VSR9 72 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 FAM71F2Q6NXP2 309 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 HS3ST6Q96QI5 342 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 PAXXQ9BUH6 204 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 IGKV1D-43A0A0B4J1Z2 117 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 REG1AP05451 166 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 LINC00869P0C866 280 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 C19orf54Q5BKX5 351 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 LINC01590Q5TEZ4 76 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 NPDC1Q9NQX5 325 aaPredicted RBP6.18□□□□□ -1.42
SH3D19-203ENST00000409598 PRR13Q9NZ81 148 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 TCF19Q9Y242 345 aa6.18□□□□□ -1.42
SH3D19-203ENST00000409598 NYNRINQ9P2P1 1898 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 IGHV3-35A0A0C4DH35 117 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 H7C1H1 209 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 CRPP02741 224 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 HKR1P10072 659 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 HIST2H2BCQ6DN03 193 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 REC114Q7Z4M0 266 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 C5orf17Q8NAS9 161 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 GALNT14Q96FL9 552 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 IGLV3-9A0A075B6K5 115 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 TRAV8-7A0A075B6U6 113 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 IGSF23A1L1A6 192 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 MGPP08493 103 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 GVQW1Q8N7I0 195 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF586Q9NXT0 402 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 RBFOX3A6NFN3 312 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 PAX1P15863 534 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 HNRNPA3P51991 378 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 TAS2R60P59551 318 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 KRTDAPP60985 99 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 HIST1H3AP68431 136 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 PAQR4Q8N4S7 273 aaPredicted RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 VOPP1Q96AW1 172 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 LPAR5Q9H1C0 372 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 PROK2Q9HC23 129 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 RCC2Q9P258 522 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 G3V3Q6 166 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 ETV2O00321 342 aaPredicted RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF207O43670 478 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 IGHV3-23P01764 117 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 MYCNOSP40205 109 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 DLK1P80370 383 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 LYPD2Q6UXB3 125 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 LURAP1LQ8IV03 231 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 OR2C3Q8N628 320 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 ARL6IP6Q8N6S5 226 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 FGFBP3Q8TAT2 258 aa6.17□□□□□ -1.42
SH3D19-203ENST00000409598 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
SH3D19-203ENST00000409598 TEX48A0A1B0GUV7 120 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF124Q15973 351 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 USF3Q68DE3 2245 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 TCF24Q7RTU0 167 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 HDHD3Q9BSH5 251 aaPredicted RBP6.16□□□□□ -1.42
SH3D19-203ENST00000409598 PXMP4Q9Y6I8 212 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 RAMP3O60896 148 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 NDUFS7O75251 213 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 HSPB1P04792 205 aaKnown RBP6.16□□□□□ -1.42
SH3D19-203ENST00000409598 INSL3P51460 131 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 NANOS3P60323 173 aaKnown RBP6.16□□□□□ -1.42
SH3D19-203ENST00000409598 PRB3Q04118 309 aaPredicted RBP6.16□□□□□ -1.42
SH3D19-203ENST00000409598 ALX4Q9H161 411 aaPredicted RBP6.16□□□□□ -1.42
SH3D19-203ENST00000409598 TRAPPC1Q9Y5R8 145 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 SMAD5-AS1Q9Y6J3 95 aa6.16□□□□□ -1.42
SH3D19-203ENST00000409598 CCDC88CQ9P219 2028 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms