RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TAGLN2P37802 199 aaKnown RBP16.67■□□□□ 0.26
USP39-203ENST00000409470 RPL29P47914 159 aaKnown RBP16.67■□□□□ 0.26
USP39-203ENST00000409470 WT1-ASQ06250 92 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 FAM90A2PQ658T7 463 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 TMEM144Q7Z5S9 345 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 MMD2Q8IY49 270 aa16.67■□□□□ 0.26
USP39-203ENST00000409470 ARHGAP32A7KAX9 2087 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 ACACBO00763 2458 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 SUB1P53999 127 aaKnown RBP eCLIP16.66■□□□□ 0.266e-9■■■□□ 18
USP39-203ENST00000409470 CD69Q07108 199 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 GAMTQ14353 236 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 PSG5Q15238 335 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 TPTE2P1Q5T6R2 138 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 OR11H6Q8NGC7 330 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 GATAD1Q8WUU5 269 aa16.66■□□□□ 0.26
USP39-203ENST00000409470 CD81P60033 236 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 PRSS8Q16651 343 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 MLANAQ16655 118 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 MRGPRG-AS1Q2M3A8 158 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 PRTN3P24158 256 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 KLRD1Q13241 179 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 TNXAQ16473 311 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 DPM3Q9P2X0 92 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 METTL1Q9UBP6 276 aaKnown RBP16.65■□□□□ 0.26
USP39-203ENST00000409470 SIGLEC9Q9Y336 463 aa16.65■□□□□ 0.26
USP39-203ENST00000409470 A0A1W2PPI3 338 aa16.64■□□□□ 0.25
USP39-203ENST00000409470 PAGE4O60829 102 aa16.64■□□□□ 0.25
USP39-203ENST00000409470 SLC16A13Q7RTY0 426 aa16.64■□□□□ 0.25
USP39-203ENST00000409470 MRPL41Q8IXM3 137 aaKnown RBP16.64■□□□□ 0.25
USP39-203ENST00000409470 C15orf54Q8N8G6 183 aa16.64■□□□□ 0.25
USP39-203ENST00000409470 SLC35E1Q96K37 410 aa16.64■□□□□ 0.25
USP39-203ENST00000409470 CRYGBP07316 175 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 GPX4P36969 197 aaPredicted RBP16.63■□□□□ 0.25
USP39-203ENST00000409470 CEACAM3P40198 252 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 RPL27AP46776 148 aaKnown RBP16.63■□□□□ 0.25
USP39-203ENST00000409470 LDLRAD2Q5SZI1 272 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 OR4F5Q8NH21 305 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 CACNG8Q8WXS5 425 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 OR4F4Q96R69 305 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 HILPDAQ9Y5L2 63 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 COLCA2A8K830 154 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 TIMM23O14925 209 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 REG1AP05451 166 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 GNB1P62873 340 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 PRR20EP86478 221 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 PRR20CP86479 221 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 PRR20DP86480 221 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 PRR20BP86481 221 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 PRR20AP86496 221 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 TMEM249Q2WGJ8 235 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 RNASEH2CQ8TDP1 164 aaKnown RBP16.63■□□□□ 0.25
USP39-203ENST00000409470 ABHD5Q8WTS1 349 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 ISOC2Q96AB3 205 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 TUBA4BQ9H853 241 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 SLC45A2Q9UMX9 530 aa16.63■□□□□ 0.25
USP39-203ENST00000409470 ZFP36P26651 326 aaKnown RBP16.62■□□□□ 0.25
USP39-203ENST00000409470 OR10J1P30954 320 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 RHOBP62745 196 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 PPP1R27Q86WC6 154 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 ACY3Q96HD9 319 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 IGKV1OR2-108A0A075B7D4 117 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 A0A1W2PRD5 423 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 A0A1W2PRF3 423 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 A0A1W2PRM7 423 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 ZNF727A8MUV8 499 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 IGHV2-5P01817 119 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 STAG3L2P0CL84 134 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 STAG3L3P0CL85 134 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 ARL14EPLP0DKL9 152 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 MAS1LP35410 378 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 OR2T6Q8NHC8 308 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 RNF5Q99942 180 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 FBXL15Q9H469 300 aa16.62■□□□□ 0.25
USP39-203ENST00000409470 CXorf1O96002 111 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 LINC00869P0C866 280 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 PAX6P26367 422 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 PLGLAQ15195 96 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 HCP5Q6MZN7 132 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 C1orf122Q6ZSJ8 110 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 VMO1Q7Z5L0 202 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 KIR3DL3Q8N743 410 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 IGSF10Q6WRI0 2623 aa16.61■□□□□ 0.25
USP39-203ENST00000409470 IGLC7A0M8Q6 106 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 ODF3BA8MYP8 253 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 TMEM250H0YL14 139 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 COMPP49747 757 aaPredicted RBP16.6■□□□□ 0.25
USP39-203ENST00000409470 LCN2P80188 198 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 ZNF674Q2M3X9 581 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 SPNS3Q6ZMD2 512 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 LHFPL4Q7Z7J7 247 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 SEPSECSQ9HD40 501 aaKnown RBP16.6■□□□□ 0.25
USP39-203ENST00000409470 MLXQ9UH92 298 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 C11orf94C9JXX5 98 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 VENTXO95231 258 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 OR2C1O95371 312 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 UBE2G2P60604 165 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 PNRC1Q12796 327 aaPredicted RBP16.6■□□□□ 0.25
USP39-203ENST00000409470 RPUSD4Q96CM3 377 aaKnown RBP16.6■□□□□ 0.25
USP39-203ENST00000409470 SMIM7Q9BQ49 75 aa16.6■□□□□ 0.25
USP39-203ENST00000409470 PLXNB1O43157 2135 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms