RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SNRNP200O75643 2136 aaKnown RBP3.07□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGHV3-15A0A0B4J1V0 119 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TRAV8-4A0A0B4J246 113 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGHV2OR16-5A0A0B4J2B6 119 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGKV1-9A0A0C4DH69 117 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 C5orf63A6NC05 138 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM235A6NFC5 223 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF705GA8MUZ8 300 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM14DPA8MWL7 114 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF736B4DX44 427 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 F5H5K5 113 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 LINC01619G3V211 115 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 G3V3Q6 166 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGLV3-1P01715 115 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 P01737 135 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 APOC1P02654 83 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 APCSP02743 223 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 SERPINA7P05543 415 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC2A1P11166 492 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 NFYAP23511 347 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF93P35789 620 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 KCNJ3P48549 501 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 PPOXP50336 477 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 LOXL1Q08397 574 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 EIF3IQ13347 325 aaKnown RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ENDOGQ14249 297 aaKnown RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSG3Q16557 428 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TAL2Q16559 108 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 FAM27BQ5VT28 67 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TEX261Q6UWH6 196 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 GLIPR1L1Q6UWM5 242 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 BHLHA15Q7RTS1 189 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 NAA40Q86UY6 237 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 C20orf196Q8IYI0 205 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR5AS1Q8N127 324 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF283Q8N7M2 679 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CYB561D1Q8N8Q1 229 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ACBD4Q8NC06 268 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF680Q8NEM1 530 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2T35Q8NGX2 323 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR8S1Q8NH09 359 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CT55Q8WUE5 264 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CACNG8Q8WXS5 425 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSMF1Q92530 271 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 NARS2Q96I59 477 aaKnown RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC25A21Q9BQT8 299 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 GINS4Q9BRT9 223 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM243Q9BU79 118 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 DDA1Q9BW61 102 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 SFXN3Q9BWM7 321 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 ARV1Q9H2C2 271 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 GPR84Q9NQS5 396 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CA10Q9NS85 328 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 U3KQ87 197 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 V9GYS6 101 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CDH23Q9H251 3354 aa3.06□□□□□ -1.92
HMGB3P18-201ENST00000406327 CCDC88CQ9P219 2028 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SZT2Q5T011 3432 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A0G2JMM0 328 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A1W2PPB8 328 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A1W2PRS3 328 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 HMSDA8MTL9 139 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 KIR3DP1A8MWS1 328 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 DISC1C4P0D8 188 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 KRBOX1C9JBD0 128 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 MCRIP1C9JLW8 97 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSPHP1O15172 72 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 NOS1APO75052 506 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 MPC2O95563 127 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 CYB5AP00167 134 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 IFNA7P01567 189 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 CST2P09228 141 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 MMP7P09237 267 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR4E1P0C645 316 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 UBBP0CG47 229 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 CXCL2P19875 107 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 CRYGSP22914 178 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 GNRHRP30968 328 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 HTR2BP41595 481 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 ATP5J2P56134 94 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 H2BFSP57053 126 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 GNG2P59768 71 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 TSPAN5P62079 268 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 RNASE10Q5GAN6 216 aaKnown RBP3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 CLVS2Q5SYC1 327 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 FBXW9Q5XUX1 488 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 IDO2Q6ZQW0 420 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 AAED1Q7RTV5 226 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC16A13Q7RTY0 426 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 TRAPPC6BQ86SZ2 158 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF101Q8IZC7 436 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 LRRC18Q8N456 261 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 C12orf45Q8N5I9 185 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR4S1Q8NGB4 309 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR13C8Q8NGS7 320 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR10D3Q8NH80 312 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2V1Q8NHB1 315 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 ASB13Q8WXK3 278 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SPTSSAQ969W0 71 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms