RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TMEM267Q0VDI3 215 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRDX4Q13162 271 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ELOCQ15369 112 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 RHEBQ15382 184 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF678Q5SXM1 525 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 GLT8D1Q68CQ7 371 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 DGAT2L6Q6ZPD8 337 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF720Q7Z2F6 126 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 TCTE3Q8IZS6 198 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 FER1L6-AS1Q8NA97 138 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF675Q8TD23 568 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 DCUN1D1Q96GG9 259 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 C1QTNF6Q9BXI9 259 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 SLC25A31Q9H0C2 315 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 Q9H521 79 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 POLR1DQ9Y2S0 133 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 SCAF11Q99590 1463 aaKnown RBP2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ADAMTSL1Q8N6G6 1762 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 ARID1AO14497 2285 aa2.94□□□□□ -1.94
HMGB1P13-201ENST00000406019 TRAPPC8Q9Y2L5 1435 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 TOPBP1Q92547 1522 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 MYH11P35749 1972 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ROBO3Q96MS0 1386 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 TRAV8-3A0A0A6YYJ7 113 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 DHRS12A0PJE2 317 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 IFITM5A6NNB3 132 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CD300LBA8K4G0 201 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 C9JQL5 133 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 H7BYZ3 331 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 M0R2Z0 102 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 AIPO00170 330 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 COX7A2P2O60397 106 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZNF324O75467 553 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 SNAPC5O75971 98 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CDRT1O95170 752 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 EPPINO95925 133 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 LHBP01229 141 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CTSDP07339 412 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 IL3P08700 152 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 PAEPP09466 180 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 UCHL1P09936 223 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 SEC11BP0C7V7 166 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CD28P10747 220 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 EVI2AP22794 236 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 CNTFRP26992 372 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 IMPA1P29218 277 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 GABRA3P34903 492 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ETV6P41212 452 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 MEF2BQ02080 365 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 HSD52Q0P140 79 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 IAH1Q2TAA2 248 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ABCA11PQ4W5N1 156 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 FAM104BQ5XKR9 115 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 RPL22L1Q6P5R6 122 aaKnown RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 RASL11AQ6T310 242 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 UNQ9165/PRO28630Q6UXU0 137 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 IZUMO2Q6UXV1 221 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 SHISA6Q6ZSJ9 500 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 LINC00596Q86U02 117 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 GKN2Q86XP6 184 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMEM86AQ8N2M4 240 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZDHHC22Q8N966 263 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 ZIC4Q8N9L1 334 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLPP5Q8NEB5 264 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR11G2Q8NGC1 345 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR51A4Q8NGJ6 313 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR10D4PQ8NGN7 298 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR5H2Q8NGV7 314 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR10D3Q8NH80 312 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 MRPS24Q96EL2 167 aaKnown RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 DERL3Q96Q80 235 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 LYSMD1Q96S90 227 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 GNB1LQ9BYB4 327 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR2H1Q9GZK4 316 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR8D2Q9GZM6 311 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR51E2Q9H255 320 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRTFDC1Q9NRG1 225 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 TVP23BQ9NYZ1 205 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 COMMD9Q9P000 198 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 NAT8Q9UHE5 227 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 PRO0461Q9UI25 63 aa2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 TROQ12816 1431 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P13-201ENST00000406019 PLXNB3Q9ULL4 1909 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 XIRP1Q702N8 1843 aaKnown RBP2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TMED7-TICAM2A0A0A6YYA0 188 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 COLCA2A8K830 154 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 H3BP45 60 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 PDCD5O14737 125 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 OR2H2O95918 312 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 CXorf1O96002 111 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 IGHMP01871 453 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 APOA2P02652 100 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 APOC3P02656 99 aa2.92□□□□□ -1.94
HMGB1P13-201ENST00000406019 CD2P06729 351 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms