RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 BANF2Q9H503 90 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 EXOSC3Q9NQT5 275 aaKnown RBP4.48□□□□□ -1.69
CNGA1-202ENST00000402813 ABRACLQ9P1F3 81 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 FLVCR1Q9Y5Y0 555 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 H0Y9J4 135 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 MYL12BO14950 172 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 EIF3IQ13347 325 aaKnown RBP4.48□□□□□ -1.69
CNGA1-202ENST00000402813 LCN12Q6JVE5 192 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 AMTNQ6UX39 209 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 VN1R4Q7Z5H5 301 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 OR52P1PQ8NH57 321 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 OR5AK2Q8NH90 309 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 AMMECR1Q9Y4X0 333 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-202ENST00000402813 NUP210LQ5VU65 1888 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 NUP210Q8TEM1 1887 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-202ENST00000402813 TRPM7Q96QT4 1865 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 ZFC3H1O60293 1989 aaKnown RBP4.48□□□□□ -1.69
CNGA1-202ENST00000402813 SCN1AP35498 2009 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 PLXNA2O75051 1894 aa4.48□□□□□ -1.69
CNGA1-202ENST00000402813 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 OR51F1A6NGY5 319 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 CGAP01215 116 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 IGHA1P01876 353 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 HLA-DPB1P04440 258 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 ZNF83P51522 516 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 RPS11P62280 158 aaKnown RBP eCLIP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 RPS27AP62979 156 aaKnown RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 NOTCH2NLQ7Z3S9 236 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 LRRTM1Q86UE6 522 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 AP1S3Q96PC3 154 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 VAMP8Q9BV40 100 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 ATG5Q9H1Y0 275 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 TCEAL2Q9H3H9 227 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 ZNF226Q9NYT6 803 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 FUT9Q9Y231 359 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 PXMP4Q9Y6I8 212 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 MCM3APO60318 1980 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 ZNF638Q14966 1978 aaKnown RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 OPRK1P41145 380 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 PRR3P79522 188 aaKnown RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 PLGLB1Q02325 96 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 NXNL2Q5VZ03 156 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 FTMTQ8N4E7 242 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 PSMF1Q92530 271 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 ELSPBP1Q96BH3 223 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 FKBP11Q9NYL4 201 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 MTFP1Q9UDX5 166 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 SCN10AQ9Y5Y9 1956 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 IGHG1P01857 330 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 RBMY1CP0DJD4 496 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 LMO4P61968 165 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 CACNG7P62955 275 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 CENPWQ5EE01 88 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 LYRM7Q5U5X0 104 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 Q6AWC8 147 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 RPS4Y2Q8TD47 263 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 SSBP3Q9BWW4 388 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-202ENST00000402813 PLEKHA3Q9HB20 300 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 LINC00312Q9Y6C7 94 aa4.47□□□□□ -1.69
CNGA1-202ENST00000402813 IGHV1OR21-1A0A087WYE8 117 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 TRAV8-6A0A0B4J262 113 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 RER1O15258 196 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 ZNHIT1O43257 154 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 PAX4O43316 350 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 NGFP01138 241 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 CRYGSP22914 178 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 MPGP29372 298 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 DRD3P35462 400 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 ZNF93P35789 620 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-202ENST00000402813 THBS3P49746 956 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 PPP1CAP62136 330 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 VMA21Q3ZAQ7 101 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 SAXO1Q8IYX7 474 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 OR10G2Q8NGC3 310 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 VSIG4Q9Y279 399 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 IGKV1D-13A0A0B4J2D9 117 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 FAM72CH0Y354 149 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 H3BQ15 152 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 IGKV1-13P0DP09 117 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 GADD45AP24522 165 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-202ENST00000402813 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 KLF17Q5JT82 389 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-202ENST00000402813 FAM72AQ5TYM5 149 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 FAM72DQ6L9T8 149 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 DEFB132Q7Z7B7 95 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 FAM72BQ86X60 149 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 KCNRGQ8N5I3 272 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 C3orf22Q8N5N4 141 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 SLC25A40Q8TBP6 338 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 NEURL3Q96EH8 262 aa4.46□□□□□ -1.7
CNGA1-202ENST00000402813 ERMAPQ96PL5 475 aaPredicted RBP4.46□□□□□ -1.7
CNGA1-202ENST00000402813 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms