RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
LSS-202ENST00000397728 NHLRC3Q5JS37 347 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 RAMP3O60896 148 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 RAB5AP20339 215 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 CLDND2Q8NHS1 167 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 TRAF4Q9BUZ4 470 aaPredicted RBP12.73□□□□□ -0.37
LSS-202ENST00000397728 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
LSS-202ENST00000397728 UPK2O00526 184 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 RAB9AP51151 201 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 NABP2Q9BQ15 211 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 DGAT2L7PQ6IED9 249 aa12.73□□□□□ -0.37
LSS-202ENST00000397728 YLPM1P49750 1951 aaKnown RBP12.73□□□□□ -0.37
LSS-202ENST00000397728 CLDN34H7C241 214 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 C8orf88P0DMB2 117 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 PDZD11Q5EBL8 140 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 MOB4Q9Y3A3 225 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 M0R1W7 72 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 LRRK1Q38SD2 2015 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 Q6ZR03 302 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 FA2HQ7L5A8 372 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 PCDH15Q96QU1 1955 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 RHOGP84095 191 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 TPTE2P1Q5T6R2 138 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 MINOS1Q5TGZ0 78 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 OR10G8Q8NGN5 311 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 MINOS1-NBL1R4GNA1 71 aa12.72□□□□□ -0.37
LSS-202ENST00000397728 LINC00862A6NCI5 91 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 RRHO14718 337 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 PDE6DO43924 150 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 C3orf36Q3SXR2 165 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 NDUFS7O75251 213 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.37
LSS-202ENST00000397728 MPZP25189 248 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 DLK1P80370 383 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.37
LSS-202ENST00000397728 COQ2Q96H96 371 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 DKK4Q9UBT3 224 aa12.71□□□□□ -0.37
LSS-202ENST00000397728 OR2T8A6NH00 312 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 DKK1O94907 266 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 IGLV1-44P01699 117 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 SMIM6P0DI80 62 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 STPG2Q8N412 459 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 RAB24Q969Q5 203 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 NAT8Q9UHE5 227 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 SIAH2O43255 324 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 AMY1AP04745 511 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 CD81P60033 236 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.38
LSS-202ENST00000397728 ELOA3CA0A087WX78 387 aaPredicted RBP12.7□□□□□ -0.38
LSS-202ENST00000397728 HSBP1O75506 76 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 SOD3P08294 240 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 MGPP08493 103 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 SAA4P35542 130 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 C5orf24Q7Z6I8 188 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 CXCL2P19875 107 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
LSS-202ENST00000397728 TEX45Q8NA69 505 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 SDHCQ99643 169 aaPredicted RBP12.7□□□□□ -0.38
LSS-202ENST00000397728 OR51M1Q9H341 326 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 MEOX2P50222 304 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 CHAC2Q8WUX2 184 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 TMPRSS5Q9H3S3 457 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 ABCA2Q9BZC7 2435 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 HIST1H1AQ02539 215 aaPredicted RBP12.7□□□□□ -0.38
LSS-202ENST00000397728 BATFQ16520 125 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 GATAD1Q8WUU5 269 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 ZNF581Q9P0T4 197 aa12.7□□□□□ -0.38
LSS-202ENST00000397728 C10orf55Q5SWW7 151 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 Q6P435 159 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 OR2D3Q8NGH3 330 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 RBFOX2O43251 390 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■■□□ 18.7
LSS-202ENST00000397728 PRTN3P24158 256 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 ITLN2Q8WWU7 325 aaPredicted RBP12.69□□□□□ -0.38
LSS-202ENST00000397728 TMEM37Q8WXS4 190 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 OR9G9P0C7N8 305 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 EFNB3Q15768 340 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 LINC00305Q7Z4B0 112 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 OBSL1O75147 1896 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 SEC14L6B5MCN3 397 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 FCN1O00602 326 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 MAS1LP35410 378 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 AQP10Q96PS8 301 aa12.69□□□□□ -0.38
LSS-202ENST00000397728 TRAV41A0A0B4J266 112 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 PSMB11A5LHX3 300 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 NAPSAO96009 420 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 TRAPPC1Q9Y5R8 145 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 IGFBP2P18065 325 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 FAM162BQ5T6X4 162 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
LSS-202ENST00000397728 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms