RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RUNX1Q01196 453 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 SMCO1Q147U7 214 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 AARDQ4LEZ3 155 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 FAM223AQ8IWN6 122 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 NECAP1Q8NC96 275 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 DUSP18Q8NEJ0 188 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 OR52B4Q8NGK2 314 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 OR52E5Q8NH55 327 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 RAX2Q96IS3 184 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 FANCD2OSQ96PS1 177 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 TMED3Q9Y3Q3 217 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 A0A1B0GU03 582 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 CCL24O00175 119 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 CYB5BO43169 146 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 MYCNOSP40205 109 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 SPCS3P61009 180 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 ERHP84090 104 aaKnown RBP14.87□□□□□ -0.03
HOXA9-202ENST00000396345 ATP5G2Q06055 141 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 KLK9Q2XQG4 91 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 ETV3LQ6ZN32 361 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 DUX3Q96PT4 197 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 ENY2Q9NPA8 101 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 CACFD1Q9UGQ2 172 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 FBXL7Q9UJT9 491 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 KLK9Q9UKQ9 250 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 NBEAL1Q6ZS30 2694 aa14.87□□□□□ -0.03
HOXA9-202ENST00000396345 IGLV11-55A0A075B6I3 123 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 HOXA1P49639 335 aaPredicted RBP14.86□□□□□ -0.03
HOXA9-202ENST00000396345 GGNBP1Q5YKI7 109 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 PLET1Q6UQ28 207 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 OR2C3Q8N628 320 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 OR11H1Q8NG94 326 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 OR1N2Q8NGR9 330 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 OR1S1Q8NH92 325 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 MITD1Q8WV92 249 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 SEC22CQ9BRL7 303 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 F11RQ9Y624 299 aaKnown RBP14.86□□□□□ -0.03
HOXA9-202ENST00000396345 CMYA5Q8N3K9 4069 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 MGAM2Q2M2H8 2515 aa14.86□□□□□ -0.03
HOXA9-202ENST00000396345 INS-IGF2F8WCM5 200 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 NXPH3O95157 252 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 NDUFB8O95169 186 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 SLC25A6P12236 298 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 C15orf32Q32M92 178 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 PDLIM3Q53GG5 364 aaPredicted RBP14.85□□□□□ -0.03
HOXA9-202ENST00000396345 SLC25A24Q6NUK1 477 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 OR1L6Q8NGR2 347 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 ZNF431Q8TF32 576 aaPredicted RBP14.85□□□□□ -0.03
HOXA9-202ENST00000396345 P2RX4Q99571 388 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 THYN1Q9P016 225 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 DMRT1Q9Y5R6 373 aa14.85□□□□□ -0.03
HOXA9-202ENST00000396345 CEBPZOSA8MTT3 80 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 ADAP1O75689 374 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 IFNA21P01568 189 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 IL5P05113 134 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 EXOSC2Q13868 293 aaKnown RBP14.84□□□□□ -0.03
HOXA9-202ENST00000396345 ZNF343Q6P1L6 599 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 OR1P1Q8NH06 330 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 DPF1Q92782 380 aa14.84□□□□□ -0.03
HOXA9-202ENST00000396345 ANKRD34BA5PLL1 514 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 INMT-MINDY4F8WBC2 141 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 HSPB1P04792 205 aaKnown RBP14.83□□□□□ -0.04
HOXA9-202ENST00000396345 SNCAP37840 140 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 MFAP2P55001 183 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 TNFRSF9Q07011 255 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 ZNF616Q08AN1 781 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 LINC00482Q8N8I6 264 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 ZNF114Q8NC26 417 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 PALMDQ9NP74 551 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 HSPB7Q9UBY9 170 aa14.83□□□□□ -0.04
HOXA9-202ENST00000396345 IGHV4OR15-8A0A075B7B6 117 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 A0A087WW49 117 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 LINC01619G3V211 115 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 PITX3O75364 302 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 OR8U8P0C7N1 319 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 FHL3Q13643 280 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 C12orf45Q8N5I9 185 aaPredicted RBP14.82□□□□□ -0.04
HOXA9-202ENST00000396345 EEF1AKMT3Q96AZ1 226 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 MARVELD1Q9BSK0 173 aa14.82□□□□□ -0.04
HOXA9-202ENST00000396345 RANGRFQ9HD47 186 aaPredicted RBP14.82□□□□□ -0.04
HOXA9-202ENST00000396345 HEYLQ9NQ87 328 aaPredicted RBP14.82□□□□□ -0.04
HOXA9-202ENST00000396345 PEF1Q9UBV8 284 aaKnown RBP14.82□□□□□ -0.04
HOXA9-202ENST00000396345 SPNP16150 400 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 CD33P20138 364 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 SUB1P53999 127 aaKnown RBP eCLIP14.81□□□□□ -0.04
HOXA9-202ENST00000396345 UXS1Q8NBZ7 420 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 WFDC9Q8NEX5 89 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 CXorf58Q96LI9 332 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 RBKSQ9H477 322 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 GPN1Q9HCN4 374 aaPredicted RBP14.81□□□□□ -0.04
HOXA9-202ENST00000396345 S4R3C0 116 aa14.81□□□□□ -0.04
HOXA9-202ENST00000396345 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.8□□□□□ -0.04
HOXA9-202ENST00000396345 MFSD2BA6NFX1 497 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 FAM90A26D6RGX4 464 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 PRAF2O60831 178 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 PTTG1O95997 202 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 IGHV3-23P01764 117 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 FAM209BQ5JX69 171 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 MISP3Q96FF7 219 aa14.8□□□□□ -0.04
HOXA9-202ENST00000396345 HIPK2Q9H2X6 1198 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 242.7 ms