RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MOSP00540 346 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 IGHV1-2P23083 117 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 LTBP1Q14766 1721 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 NUP210Q8TEM1 1887 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-204ENST00000395898 JMJD8Q96S16 334 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 IL36BQ9NZH7 164 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 FOXI3A8MTJ6 420 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-204ENST00000395898 LHX2P50458 406 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 RPRMQ9NS64 109 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 COL6A6A6NMZ7 2263 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM131Q92545 1883 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 A0A087WWC5 75 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 EFEMP2O95967 443 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ASIPP42127 132 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 MRPL13Q9BYD1 178 aaKnown RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 A0A0G2JK05 382 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM262E9PQX1 116 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 OR10S1Q8NGN2 331 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ZXDCQ2QGD7 858 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 MRPL14Q6P1L8 145 aaKnown RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 CIARTQ8N365 385 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 OR52E5Q8NH55 327 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TNFRSF14Q92956 283 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 JKAMPQ9P055 326 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 CD69Q07108 199 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 RPL39P5Q59GN2 51 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF385CQ66K41 422 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 GTF3AQ92664 365 aaKnown RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF414Q96IQ9 312 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 VCX2Q9H322 139 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 C21orf62Q9NYP8 219 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 PLXNB3Q9ULL4 1909 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 FAM90A9PA6NNJ1 464 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM183AQ8IXX5 376 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 IFI27L2Q9H2X8 130 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 SDF2L1Q9HCN8 221 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 C19orf67A6NJJ6 358 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 C12orf77C9JDV5 145 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 H3BRM9 83 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 SOD3P08294 240 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 RSPO4Q2I0M5 234 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 LINC01560Q8TB33 94 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 SMIM13P0DJ93 91 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 FBXL15Q9H469 300 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM160Q9NX00 188 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 CACNA1BQ00975 2339 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 PEX7O00628 323 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 CGAP01215 116 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 RNASE1P07998 156 aaKnown RBP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 SRSF7Q16629 238 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ATP1A1-AS1Q5TC04 95 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF497Q6ZNH5 498 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 WDYHV1Q96HA8 205 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
VPS13C-204ENST00000395898 LOC102723996A0A087X1L8 192 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 OR11H12B2RN74 326 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 DDTP30046 118 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 C1QL2Q7Z5L3 287 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM144Q7Z5S9 345 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 PPP1R27Q86WC6 154 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 TEX45Q8NA69 505 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 OR11H1Q8NG94 326 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 OR11H2Q8NH07 326 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 KLK15Q9H2R5 256 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 IL6RP08887 468 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-204ENST00000395898 BIVMQ86UB2 503 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 NUDT10Q8NFP7 164 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 OR11H4Q8NGC9 324 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 RCC1LQ96I51 464 aaKnown RBP4.59□□□□□ -1.67
VPS13C-204ENST00000395898 NPFFR1Q9GZQ6 430 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 SEMA5BQ9P283 1151 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 LOC102724200A0A096LPH7 203 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-204ENST00000395898 C15orf61A6NNL5 157 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 MPTX1A8MV57 137 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 LINC00271P0C7V0 271 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 IGFBP3P17936 291 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-204ENST00000395898 DMRT1Q9Y5R6 373 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 TCF21O43680 179 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 IGHV3-48P01763 117 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 PEF1Q9UBV8 284 aaKnown RBP4.59□□□□□ -1.67
VPS13C-204ENST00000395898 TANC1Q9C0D5 1861 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 GPR183P32249 361 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 FBXL7Q9UJT9 491 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 EML6Q6ZMW3 1958 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 PLXNA4Q9HCM2 1894 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 STAG3L3P0CL85 134 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 MORN2Q502X0 79 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF506Q5JVG8 444 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 DUX3Q96PT4 197 aa4.59□□□□□ -1.67
VPS13C-204ENST00000395898 NBR2O15453 112 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 IGFBP2P18065 325 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 TRAV24A0A0B4J272 114 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 LINC01549A6NIU2 74 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 C1QTNF9BB2RNN3 333 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms