RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ETV3LQ6ZN32 361 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 HSD17B13Q7Z5P4 300 aaPredicted RBP16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 TMEM170AQ8WVE7 144 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 ZNF48Q96MX3 618 aaPredicted RBP16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 FAM103A1Q9BTL3 118 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 BORCS7-ASMTA0A0B4J1R7 106 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 IGHV7-81A0A0B4J1V7 117 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 JTBO76095 146 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 REG1AP05451 166 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 RNASE2P10153 161 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 ATP5IP56385 69 aaPredicted RBP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 BSXQ3C1V8 233 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 C2orf83Q53S99 150 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 C16orf82Q7Z2V1 217 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 OR5R1Q8NH85 324 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 ST8SIA2Q92186 375 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 PINX1Q96BK5 328 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 SRSF8Q9BRL6 282 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 DFFBO76075 338 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 TPT1P13693 172 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 AREGP15514 252 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 SUB1P53999 127 aaKnown RBP eCLIP16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 ZNF266Q14584 549 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 ATP5SQ99766 215 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 SMR3AQ99954 134 aa16.18■□□□□ 0.18
VCPKMT-202ENST00000395860 M0QZK8 103 aa16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 EIF5AP63241 154 aaKnown RBP16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 TEX261Q6UWH6 196 aa16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 STOML3Q8TAV4 291 aa16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 HSPB9Q9BQS6 159 aa16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 PRDM13Q9H4Q3 707 aa16.17■□□□□ 0.18
VCPKMT-202ENST00000395860 SH2D7A6NKC9 451 aaPredicted RBP16.16■□□□□ 0.18
VCPKMT-202ENST00000395860 NDPQ00604 133 aa16.16■□□□□ 0.18
VCPKMT-202ENST00000395860 TUSC1Q2TAM9 212 aa16.16■□□□□ 0.18
VCPKMT-202ENST00000395860 P2RX4Q99571 388 aa16.16■□□□□ 0.18
VCPKMT-202ENST00000395860 TNFRSF19Q9NS68 423 aa16.16■□□□□ 0.18
VCPKMT-202ENST00000395860 CFDP00746 253 aaPredicted RBP16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 AMY1AP04745 511 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 ATP6V1FQ16864 119 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 UBAC2Q8NBM4 344 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 ZNF114Q8NC26 417 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 TMEM160Q9NX00 188 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 LY6G6DO95868 133 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 BAP18Q8IXM2 172 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 PARP11Q9NR21 331 aa16.15■□□□□ 0.18
VCPKMT-202ENST00000395860 NAV3Q8IVL0 2385 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 PRSS46E5RG02 174 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 HOXA3O43365 443 aaPredicted RBP16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 IFNA5P01569 189 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 CD99P14209 185 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 C9orf152Q5JTZ5 239 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 SLC25A24Q6NUK1 477 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 SIGLECL1Q8N7X8 197 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 ZNF680Q8NEM1 530 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 TMEM147Q9BVK8 224 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 VPREB3Q9UKI3 123 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 FBXO7Q9Y3I1 522 aa16.14■□□□□ 0.17
VCPKMT-202ENST00000395860 IFNA7P01567 189 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 EXOSC2Q13868 293 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 TMUB1Q9BVT8 246 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 ZFHX3Q15911 3703 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 UBE2L5PA0A1B0GUS4 154 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 ATP6V0E1O15342 81 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 HSD17B11Q8NBQ5 300 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 LFNGQ8NES3 379 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 OR1P1Q8NH06 330 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 SGMS2Q8NHU3 365 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 UQCC1Q9NVA1 299 aa16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 F11RQ9Y624 299 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-202ENST00000395860 RGS13O14921 159 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 EGR2P11161 476 aaPredicted RBP16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 CTRB1P17538 263 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 DLK1P80370 383 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 CTRB2Q6GPI1 263 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 ALKAL2Q6UX46 152 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 C19orf35Q6ZS72 473 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 GGACTQ9BVM4 153 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 NOTCH2Q04721 2471 aa16.12■□□□□ 0.17
VCPKMT-202ENST00000395860 DEFA4P12838 97 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 FOSL1P15407 271 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 SCGB2A2Q13296 93 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 ASPHD1Q5U4P2 390 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 RBMS3Q6XE24 437 aaKnown RBP16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 ZNF767PQ75MW2 155 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 SCGB1C1Q8TD33 95 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 RNASEH2CQ8TDP1 164 aaKnown RBP16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 PHYHIPLQ96FC7 376 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 GINS3Q9BRX5 216 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 WNT10AQ9GZT5 417 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 ARV1Q9H2C2 271 aa16.11■□□□□ 0.17
VCPKMT-202ENST00000395860 SMCO3A2RU48 225 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 LINC01548A6NM66 108 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 NPIPB5A8MRT5 1133 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 VWC2Q2TAL6 325 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 UBQLN2Q9UHD9 624 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 ACANP16112 2415 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 OTOGQ6ZRI0 2925 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 BAHCC1Q9P281 2608 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 CORTO00230 105 aa16.1■□□□□ 0.17
VCPKMT-202ENST00000395860 CRYGCP07315 174 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms