RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 LINC00473A8K010 186 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 MFAP4P55083 255 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 WDR25Q64LD2 544 aaPredicted RBP13.65□□□□□ -0.22
SNX9-201ENST00000392185 DKK4Q9UBT3 224 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 TGOLN2O43493 480 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 C8orf88P0DMB2 117 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 OR4D5Q8NGN0 318 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 IFI27L2Q9H2X8 130 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 LIME1Q9H400 295 aa13.65□□□□□ -0.22
SNX9-201ENST00000392185 MUC22E2RYF6 1773 aaPredicted RBP13.65□□□□□ -0.22
SNX9-201ENST00000392185 CEP192Q8TEP8 1941 aa13.65□□□□□ -0.23
SNX9-201ENST00000392185 TIMM23O14925 209 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 DLX1P56177 255 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 KLRD1Q13241 179 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 GAFA1Q96PS6 74 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 RFNGQ9Y644 331 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 HTN1P15515 57 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 LRTM2Q8N967 370 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 OR10W1Q8NGF6 305 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 CGB1A6NKQ9 187 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 UPK2O00526 184 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
SNX9-201ENST00000392185 RNF212Q495C1 297 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 IGFL2Q6UWQ7 119 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 FAM169BQ8N8A8 192 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 SGMS2Q8NHU3 365 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 IL4P05112 153 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 PMCHP20382 165 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 CRYBB3P26998 211 aa13.64□□□□□ -0.23
SNX9-201ENST00000392185 GRNP28799 593 aaKnown RBP13.64□□□□□ -0.23
SNX9-201ENST00000392185 TRAV3A0A0B4J244 114 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 A0A0G2JRQ6 117 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 CFPP27918 469 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 PRNTQ86SH4 94 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 OR51G1Q8NGK1 321 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 ORM1P02763 201 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 MYOD1P15172 320 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 ZNF137PP52743 207 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
SNX9-201ENST00000392185 WFDC1Q9HC57 220 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
SNX9-201ENST00000392185 GAR1Q9NY12 217 aaKnown RBP13.63□□□□□ -0.23
SNX9-201ENST00000392185 RAB5AP20339 215 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 RPEL1Q2QD12 228 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 Q6ZRM9 215 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 BPIFA4PQ86YQ2 179 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 SIGLECL1Q8N7X8 197 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 AUP1Q9Y679 476 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 P01737 135 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 PPP1R27Q86WC6 154 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
SNX9-201ENST00000392185 C20orf202A1L168 122 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 ZNF207O43670 478 aaKnown RBP13.62□□□□□ -0.23
SNX9-201ENST00000392185 FAM3BP58499 235 aaPredicted RBP13.62□□□□□ -0.23
SNX9-201ENST00000392185 NMSQ5H8A3 153 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 OR10D4PQ8NGN7 298 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 TMEM18Q96B42 140 aa13.62□□□□□ -0.23
SNX9-201ENST00000392185 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 IGLV1-44P01699 117 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 CSN3P07498 182 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 IGHV1-8P0DP01 117 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 AARDQ4LEZ3 155 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 PAX6P26367 422 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 BMI1P35226 326 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 KRTDAPP60985 99 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 HAX1O00165 279 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 13.7
SNX9-201ENST00000392185 SRSF7Q16629 238 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX9-201ENST00000392185 GATAD1Q8WUU5 269 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 AP1S3Q96PC3 154 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 FUT9Q9Y231 359 aa13.61□□□□□ -0.23
SNX9-201ENST00000392185 FOXA2Q9Y261 457 aaPredicted RBP13.61□□□□□ -0.23
SNX9-201ENST00000392185 SETD2Q9BYW2 2564 aaPredicted RBP13.61□□□□□ -0.23
SNX9-201ENST00000392185 IGHV2-26A0A0B4J1V2 119 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
SNX9-201ENST00000392185 IER3P46695 156 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 EFNA4P52798 201 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 TMEM208Q9BTX3 173 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 PARLQ9H300 379 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 USP9XQ93008 2570 aaPredicted RBP13.6□□□□□ -0.23
SNX9-201ENST00000392185 TRBV6-6A0A0A6YYG2 114 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 GCSAMLQ5JQS6 135 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 WNT10AQ9GZT5 417 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 OR51M1Q9H341 326 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 B4DEV8 164 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 GCHFRP30047 84 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 DMRTA2Q96SC8 542 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 C12orf57Q99622 126 aa13.6□□□□□ -0.23
SNX9-201ENST00000392185 MBNL3Q9NUK0 354 aaKnown RBP13.6□□□□□ -0.23
SNX9-201ENST00000392185 TRAV40A0A0B4J280 105 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms