RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 HIST1H2BNQ99877 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BMQ99879 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 TM2D3Q9BRN9 247 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 EFCAB11Q9BUY7 163 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SCRT1Q9BWW7 348 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 OR8D2Q9GZM6 311 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CHST6Q9GZX3 395 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 PBOV1Q9GZY1 135 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FAM107BQ9H098 131 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SMDT1Q9H4I9 107 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 LRTM1Q9HBL6 345 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 NAT8Q9UHE5 227 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 PCTPQ9UKL6 214 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HSPB11Q9Y547 144 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SHANK1Q9Y566 2161 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RBM7Q9Y580 266 aaKnown RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HEY1Q9Y5J3 304 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 R4GN34 69 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MINOS1-NBL1R4GNA1 71 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 KIAA2026Q5HYC2 2103 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ATAD5Q96QE3 1844 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RTL1A6NKG5 1358 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ADAMTSL1Q8N6G6 1762 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HECW1Q76N89 1606 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 PTPRJQ12913 1337 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF106Q9H2Y7 1883 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SYNMO15061 1565 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 MYH11P35749 1972 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 GPR179Q6PRD1 2367 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SCN4AP35499 1836 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DIDO1Q9BTC0 2240 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 IGLV4-60A0A075B6I1 120 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 IGHV3-15A0A0B4J1V0 119 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TRAV38-1A0A0B4J264 116 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A1B0GU33 70 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A1W2PQD3 144 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 PRORSD1PA6NEY8 169 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF860A6NHJ4 632 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 A8MU10 97 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 E7EQ34 232 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 J3QRK9 145 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 M0R378 163 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 KPNA4O00629 521 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TP53I11O14683 189 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TAX1BP3O14907 124 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF73O43830 326 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR2T1O43869 369 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 IFNA10P01566 189 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 APOA2P02652 100 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR10J4P0C629 311 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 GZMBP10144 247 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DEFA4P12838 97 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 RPL7P18124 248 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OGNP20774 298 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 RPS4Y1P22090 263 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 NFYBP25208 207 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 BLVRBP30043 206 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 RPL28P46779 137 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 XCL1P47992 114 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 EVX1P49640 407 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 INSL3P51460 131 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 KRTAP10-12P60413 245 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CDC42P60953 191 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 RPS11P62280 158 aaKnown RBP eCLIP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 PSPHP78330 225 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 AKR1C1Q04828 323 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 FOXF1Q12946 379 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 EIF4EBP1Q13541 118 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 MIAQ16674 131 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 RRN3P1Q2M238 152 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SCGB2B2Q4G0G5 96 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DNLZQ5SXM8 178 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 LYRM7Q5U5X0 104 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 AMMECR1LQ6DCA0 310 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 HMGN2P46Q86SG4 172 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DHFR2Q86XF0 187 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CLVS1Q8IUQ0 354 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TMEM86AQ8N2M4 240 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 NUP35Q8NFH5 326 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR51T1Q8NGJ9 327 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR8D4Q8NGM9 314 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR9Q1Q8NGQ5 310 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 WFDC5Q8TCV5 224 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SMCR5Q8TEV8 140 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DCANP1Q8TF63 244 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 THEM6Q8WUY1 208 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SKA2Q8WVK7 121 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 LZICQ8WZA0 190 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 BORCS5Q969J3 196 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SLAMF6Q96DU3 332 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ZC2HC1AQ96GY0 325 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CCDC115Q96NT0 180 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 GPX7Q96SL4 187 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DOHHQ9BU89 302 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CCDC32Q9BV29 185 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 MND1Q9BWT6 205 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 KRTAP4-2Q9BYR5 136 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 IMUPQ9GZP8 106 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms