RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RRHO14718 337 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 CFAP161Q6P656 301 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-201ENST00000388948 TRAV14DV4A0A0A6YYC5 116 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 NBEAP1P0C6P0 100 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 LINC01590Q5TEZ4 76 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 LEMD1Q68G75 181 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
LRRK1-201ENST00000388948 PTPRFP10586 1907 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 DTX2Q86UW9 622 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 GCM2O75603 506 aaPredicted RBP12.48□□□□□ -0.41
LRRK1-201ENST00000388948 C1QL1O75973 258 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 ZP1P60852 638 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 SRSF6Q13247 344 aaKnown RBP12.48□□□□□ -0.41
LRRK1-201ENST00000388948 A0A0G2JK05 382 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 A0A0G2JNJ9 132 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 CD7P09564 240 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 FAM209BQ5JX69 171 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 Q9UFV3 132 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 PAM16Q9Y3D7 125 aa12.48□□□□□ -0.41
LRRK1-201ENST00000388948 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
LRRK1-201ENST00000388948 C1QL2Q7Z5L3 287 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF345Q14585 488 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
LRRK1-201ENST00000388948 VMO1Q7Z5L0 202 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF236Q9UL36 1845 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 PLA2G10O15496 165 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 OR4D5Q8NGN0 318 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 TIMM23O14925 209 aa12.47□□□□□ -0.41
LRRK1-201ENST00000388948 DNAL4O96015 105 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.41
LRRK1-201ENST00000388948 IGHV1-46P01743 117 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 GTF3C1Q12789 2109 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 PAX1P15863 534 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
LRRK1-201ENST00000388948 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 C7orf66A4D0T2 115 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 C7orf71A4D174 169 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 PSCAO43653 123 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 F12P00748 615 aaPredicted RBP12.46□□□□□ -0.41
LRRK1-201ENST00000388948 MT-ND6P03923 174 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 HIST1H4GQ99525 98 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
LRRK1-201ENST00000388948 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.42
LRRK1-201ENST00000388948 SAA2P0DJI9 122 aaPredicted RBP12.46□□□□□ -0.42
LRRK1-201ENST00000388948 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
LRRK1-201ENST00000388948 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 RNF114Q9Y508 228 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 LCTP09848 1927 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 RNF223E7ERA6 249 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 UCP3P55916 312 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 REC114Q7Z4M0 266 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 TMEM70Q9BUB7 260 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 CRIM1Q9NZV1 1036 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 TMEM14DPA8MWL7 114 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
LRRK1-201ENST00000388948 ERVK11-1P61568 191 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 SAA1P0DJI8 122 aaPredicted RBP12.45□□□□□ -0.42
LRRK1-201ENST00000388948 KLK2P20151 261 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 CA7P43166 264 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 FAM71F2Q6NXP2 309 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 H3BUX3 64 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
LRRK1-201ENST00000388948 IGFBP2P18065 325 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 SELENOKQ9Y6D0 94 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 TFF1P04155 84 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF79Q15937 498 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 SIGIRRQ6IA17 410 aa12.45□□□□□ -0.42
LRRK1-201ENST00000388948 LEPROTL1O95214 131 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
LRRK1-201ENST00000388948 OR11H4Q8NGC9 324 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
LRRK1-201ENST00000388948 LEPP41159 167 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 RALGAPA2Q2PPJ7 1873 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 PIN1P1O15428 100 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 GCHFRP30047 84 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 TMEM187Q14656 261 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms