RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 ARPC4P59998 168 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 PYDC2Q56P42 97 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 THOC7Q6I9Y2 204 aaKnown RBP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 SPSB3Q6PJ21 355 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 HSD17B13Q7Z5P4 300 aaPredicted RBP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 ZBTB34Q8NCN2 500 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 BEST4Q8NFU0 473 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 BSCL2Q96G97 398 aaPredicted RBP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 QTRT1Q9BXR0 403 aaKnown RBP11.85□□□□□ -0.51
VCX3A-201ENST00000381089 MFFQ9GZY8 342 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 SCPEP1Q9HB40 452 aa11.85□□□□□ -0.51
VCX3A-201ENST00000381089 HERC2O95714 4834 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 TNFSF12O43508 249 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 DEDDO75618 318 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 HPRT1P00492 218 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 NQO2P16083 231 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 ODF3L2Q3SX64 289 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 SPANXN2Q5MJ10 180 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 C15orf40Q8WUR7 153 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 SOSTQ9BQB4 213 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
VCX3A-201ENST00000381089 IGLC7A0M8Q6 106 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 CGB1A6NKQ9 187 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 SULT1C2O00338 296 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 NDUFA4O00483 81 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 UPK2O00526 184 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 IFNA4P05014 189 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 FGF2P09038 288 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 RPA2P15927 270 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 HLA-DMAP28067 261 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 RCVRNP35243 200 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 CMC4P56277 68 aaPredicted RBP11.83□□□□□ -0.52
VCX3A-201ENST00000381089 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 GDPD1Q8N9F7 314 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 FCAMRQ8WWV6 532 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 ATP6V0BQ99437 205 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 C20orf24Q9BUV8 137 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
VCX3A-201ENST00000381089 GABARAPH6UMI1 98 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 PMP2P02689 132 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 FCGR2CP31995 323 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 MRPS10P82664 201 aaKnown RBP11.82□□□□□ -0.52
VCX3A-201ENST00000381089 ZNF79Q15937 498 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 POU2AF1Q16633 256 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 OR5B3Q8NH48 314 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 SMIM4Q8WVI0 70 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 TMEM140Q9NV12 185 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 RABL2AQ9UBK7 228 aaPredicted RBP11.82□□□□□ -0.52
VCX3A-201ENST00000381089 RABL2BQ9UNT1 228 aa11.82□□□□□ -0.52
VCX3A-201ENST00000381089 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 K7EMT4 169 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 PPYP01298 95 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 TRAPPC2P0DI81 140 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 TRAPPC2BP0DI82 140 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 ERVK-16P61578 105 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
VCX3A-201ENST00000381089 OR5H2Q8NGV7 314 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 C11orf45Q8TAV5 145 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 BORCS5Q969J3 196 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 RARRES2Q99969 163 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 SLC5A7Q9GZV3 580 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 PLEKHA2Q9HB19 425 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 MTFP1Q9UDX5 166 aa11.81□□□□□ -0.52
VCX3A-201ENST00000381089 C15orf62A8K5M9 175 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 M0QYG6 137 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 CTDSPLO15194 276 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 SERPINE2P07093 398 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
VCX3A-201ENST00000381089 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
VCX3A-201ENST00000381089 HRH1P35367 487 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 ETV6P41212 452 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 TCTAP57738 103 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 UBAC2Q8NBM4 344 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 SRRQ9GZT4 340 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 COMMD9Q9P000 198 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
VCX3A-201ENST00000381089 TRAV3A0A0B4J244 114 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 GSTZ1O43708 216 aaPredicted RBP11.79□□□□□ -0.52
VCX3A-201ENST00000381089 NAT1P18440 290 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 RFX2P48378 723 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 TAS2R46P59540 309 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
VCX3A-201ENST00000381089 Q56UQ5 140 aa11.79□□□□□ -0.52
VCX3A-201ENST00000381089 AADACL3Q5VUY0 350 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms