RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ZNF785A8K8V0 405 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 OR11H12B2RN74 326 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 GABARAPH6UMI1 98 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 AKR1C2P52895 323 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 Q56UQ5 140 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
USP11-202ENST00000377078 CLVS1Q8IUQ0 354 aaPredicted RBP12.94□□□□□ -0.34
USP11-202ENST00000377078 TMEM229BQ8NBD8 167 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 ISOC1Q96CN7 298 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 BCL7BQ9BQE9 202 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 ZNF436Q9C0F3 470 aaPredicted RBP12.94□□□□□ -0.34
USP11-202ENST00000377078 MRPL27Q9P0M9 148 aaKnown RBP12.94□□□□□ -0.34
USP11-202ENST00000377078 COPZ2Q9P299 210 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 RABL2AQ9UBK7 228 aaPredicted RBP12.94□□□□□ -0.34
USP11-202ENST00000377078 RABL2BQ9UNT1 228 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 CEPT1Q9Y6K0 416 aa12.94□□□□□ -0.34
USP11-202ENST00000377078 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 RAB3DO95716 219 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 CD7P09564 240 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 PPP5CP53041 499 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 ERHP84090 104 aaKnown RBP12.93□□□□□ -0.34
USP11-202ENST00000377078 MEF2DQ14814 521 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 BTNL8Q6UX41 500 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 LHFPL1Q86WI0 220 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 TMEM61Q8N0U2 210 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 UBAC2Q8NBM4 344 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 TERB2Q8NHR7 220 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 DAZ1Q9NQZ3 744 aaKnown RBP12.93□□□□□ -0.34
USP11-202ENST00000377078 MLXQ9UH92 298 aa12.93□□□□□ -0.34
USP11-202ENST00000377078 IGHV3-35A0A0C4DH35 117 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 B3GALNT1O75752 331 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 LYL1P12980 280 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 EDN2P20800 178 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 HSPE1P61604 102 aaKnown RBP12.92□□□□□ -0.34
USP11-202ENST00000377078 PRCDQ00LT1 54 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 TRIM16LQ309B1 348 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 STEAP1BQ6NZ63 245 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 SCARB1Q8WTV0 552 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 TMEM190Q8WZ59 177 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
USP11-202ENST00000377078 IGHV3-21A0A0B4J1V1 117 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 C3orf85A0A1B0GTC6 90 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 NDUFA4O00483 81 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 SCAF4O95104 1147 aaKnown RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 IGKV1-39P01597 117 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 CD74P04233 296 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 IGKV1D-39P04432 117 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 C8orf88P0DMB2 117 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 PI3P19957 117 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 MFAP2P55001 183 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 TMBIM6P55061 237 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 SPCS2Q15005 226 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 LAMTOR1Q6IAA8 161 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 OR2C3Q8N628 320 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 RNASE11Q8TAA1 199 aaKnown RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 RRNAD1Q96FB5 475 aaKnown RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 MIXL1Q9H2W2 232 aa12.91□□□□□ -0.34
USP11-202ENST00000377078 CCDC59Q9P031 241 aaKnown RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 C14orf166Q9Y224 244 aaKnown RBP12.91□□□□□ -0.34
USP11-202ENST00000377078 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 K7EIM0 57 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
USP11-202ENST00000377078 SNCAP37840 140 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 IL18Q14116 193 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 SLC35G3Q8N808 338 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 SMIM4Q8WVI0 70 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 DIRAS2Q96HU8 199 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 TXN2Q99757 166 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
USP11-202ENST00000377078 CTDSP2O14595 271 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 IFNA17P01571 189 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
USP11-202ENST00000377078 MFAP4P55083 255 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
USP11-202ENST00000377078 SELENOKQ9Y6D0 94 aa12.89□□□□□ -0.35
USP11-202ENST00000377078 C15orf62A8K5M9 175 aa12.88□□□□□ -0.35
USP11-202ENST00000377078 K7EMT4 169 aa12.88□□□□□ -0.35
USP11-202ENST00000377078 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
USP11-202ENST00000377078 SUB1P53999 127 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP11-202ENST00000377078 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
USP11-202ENST00000377078 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
USP11-202ENST00000377078 CHRDL1Q9BU40 450 aa12.88□□□□□ -0.35
USP11-202ENST00000377078 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms