RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SSBP3Q9BWW4 388 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-201ENST00000376656 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 CXXC4Q9H2H0 198 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 COX11Q9Y6N1 276 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-201ENST00000376656 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 UBE2V1Q13404 147 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 TNXAQ16473 311 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 IFI27L2Q9H2X8 130 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 TOMM40O96008 361 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 SMIM21Q3B7S5 101 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 NEUROG1Q92886 237 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 LEAP2Q969E1 77 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 TECRQ9NZ01 308 aaKnown RBP13.55□□□□□ -0.24
TRIM39-201ENST00000376656 MRPS16Q9Y3D3 137 aaKnown RBP13.55□□□□□ -0.24
TRIM39-201ENST00000376656 ARL2-SNX15V9GYD0 113 aa13.55□□□□□ -0.24
TRIM39-201ENST00000376656 IZUMO1RA6ND01 250 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 IGHV2-26A0A0B4J1V2 119 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 MEOX1P50221 254 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-201ENST00000376656 SELENOVP59797 346 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 LYG1Q8N1E2 194 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 PLEKHA3Q9HB20 300 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 IGKV1OR2-108A0A075B7D4 117 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 PPOXP50336 477 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 Q56UQ5 140 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 ZNF738Q8NE65 137 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 C22orf15Q8WYQ4 148 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-201ENST00000376656 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
TRIM39-201ENST00000376656 LOC105371242A0A075B767 164 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 PRDX2P32119 198 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 HSPE1P61604 102 aaKnown RBP13.53□□□□□ -0.24
TRIM39-201ENST00000376656 SPACA3Q8IXA5 215 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 DDB2Q92466 427 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 ENY2Q9NPA8 101 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 AGFG2O95081 481 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 GDF5OSQ5U4N7 250 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 TRAT1Q6PIZ9 186 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
TRIM39-201ENST00000376656 DUSP13Q9UII6 198 aa13.53□□□□□ -0.24
TRIM39-201ENST00000376656 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-201ENST00000376656 LOXL3P58215 753 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 PMCHL1Q16048 86 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 LRRC29Q8WV35 223 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 GAL3ST2Q9H3Q3 398 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 FAM181BA6NEQ2 426 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 IGLL1P15814 213 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 OR4F17Q8NGA8 305 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 OR4S2Q8NH73 311 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 MAFAQ8NHW3 353 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-201ENST00000376656 TP73-AS1Q9UF72 201 aa13.52□□□□□ -0.24
TRIM39-201ENST00000376656 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.25
TRIM39-201ENST00000376656 HSBP1O75506 76 aa13.52□□□□□ -0.25
TRIM39-201ENST00000376656 CEACAM8P31997 349 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-201ENST00000376656 FABP6P51161 128 aa13.52□□□□□ -0.25
TRIM39-201ENST00000376656 FOXA2Q9Y261 457 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-201ENST00000376656 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
TRIM39-201ENST00000376656 TNCP24821 2201 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 ARG2P78540 354 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 PRR31Q5SQ13 230 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 SPATA12Q7Z6I5 190 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 ALKBH7Q9BT30 221 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-201ENST00000376656 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 SPRR3Q9UBC9 169 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 IGHV2OR16-5A0A0B4J2B6 119 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 M0R2Z0 102 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 GPR6P46095 362 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-201ENST00000376656 MLANAQ16655 118 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 CORO2AQ92828 525 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 ABI3Q9P2A4 366 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 K7EP13 123 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 MFAP2P55001 183 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
TRIM39-201ENST00000376656 ZNF355PQ9NSJ1 428 aa13.51□□□□□ -0.25
TRIM39-201ENST00000376656 IGKV1D-17A0A075B6S4 117 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 PRRC2CQ9Y520 2896 aaKnown RBP13.5□□□□□ -0.25
TRIM39-201ENST00000376656 KIR2DS2P43631 304 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 TBR1Q16650 682 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 FBLN7Q53RD9 439 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 MORN5Q5VZ52 161 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
TRIM39-201ENST00000376656 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 SSBP4Q9BWG4 385 aaPredicted RBP13.5□□□□□ -0.25
TRIM39-201ENST00000376656 OR51B2Q9Y5P1 312 aa13.5□□□□□ -0.25
TRIM39-201ENST00000376656 IGHV3OR15-7A0A075B7D8 119 aa13.49□□□□□ -0.25
TRIM39-201ENST00000376656 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms