RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 A0A096LPE4 126 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 A0A1W2PPZ6 126 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 TM4SF19Q96DZ7 209 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 ZNF818PQ6ZRF7 136 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 CSRP3P50461 194 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 RNASE7Q9H1E1 156 aaKnown RBP5.57□□□□□ -1.52
UBR4-204ENST00000375254 WDR83OSQ9Y284 106 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 FRMPD1Q5SYB0 1578 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 IGLL1P15814 213 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 TMEM74BQ9NUR3 256 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 SMIM27A0A1W2PRY6 76 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 ZIC3O60481 467 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 FOXF1Q12946 379 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 LINC01590Q5TEZ4 76 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 GFRA1P56159 465 aa5.57□□□□□ -1.52
UBR4-204ENST00000375254 MED12Q93074 2177 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 GTSCR1Q86UQ5 136 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 CRPP02741 224 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 MRPS36P82909 103 aaKnown RBP5.56□□□□□ -1.52
UBR4-204ENST00000375254 EFNB3Q15768 340 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 Q71RC1 249 aaPredicted RBP5.56□□□□□ -1.52
UBR4-204ENST00000375254 IDI2-AS1Q9NZ38 188 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 K7EQS6 105 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 DUX3Q96PT4 197 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 CEACAM5P06731 702 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 SPEM2Q0P670 501 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 Q6ZNB5 142 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 SMIM14Q96QK8 99 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.56□□□□□ -1.52
UBR4-204ENST00000375254 ZNF721Q8TF20 911 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 A0A1W2PRD5 423 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 TAX1BP3O14907 124 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 RPL27AP46776 148 aaKnown RBP5.56□□□□□ -1.52
UBR4-204ENST00000375254 EIF4EBP2Q13542 120 aaPredicted RBP5.56□□□□□ -1.52
UBR4-204ENST00000375254 SLC25A47Q6Q0C1 308 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 FAM159AQ6UWV7 190 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 HIGD1BQ9P298 99 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 RNF7Q9UBF6 113 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 TRAV12-3A0A0B4J271 114 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 ZG16O60844 167 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 SLC37A2Q8TED4 501 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 MROH1Q8NDA8 1641 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 PDE6GP18545 87 aa5.56□□□□□ -1.52
UBR4-204ENST00000375254 PRSS29PA6NIE9 313 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 PRR33A8MZF0 331 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 SNRPD3P62318 126 aaKnown RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 FAM231DQ6ZW35 169 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 JPT1Q9UK76 154 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 TEX48A0A1B0GUV7 120 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 NDUFC2-KCTD14E9PQ53 114 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 NPFFO15130 113 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 GLRXP35754 106 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 GUSBP11Q6P575 273 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 TMEM219Q86XT9 240 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 CXCL13O43927 109 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 AHCTF1Q8WYP5 2266 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 MST1LQ2TV78 715 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 Q6ZS49 121 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 LOXL2Q9Y4K0 774 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 CITO14578 2027 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 SRSF2Q01130 221 aaKnown RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 SMRP1Q8NCR6 262 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 MBNL3Q9NUK0 354 aaKnown RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 HAX1O00165 279 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 CEACAM4O75871 244 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 FAM57AQ8TBR7 257 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 IGLV1-36A0A0B4J1U3 117 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 H0YJW9 148 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 COL9A1P20849 921 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 FOXG1P55316 489 aaPredicted RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 RPP25LQ8N5L8 163 aaKnown RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 SHROOM2Q13796 1616 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 C2CD4DB7Z1M9 353 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 DEFB118Q96PH6 123 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 CFHR5Q9BXR6 569 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 ESPL1Q14674 2120 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 LILRA3Q8N6C8 439 aaPredicted RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 CACNA1EQ15878 2313 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 SHISA3A0PJX4 238 aa5.55□□□□□ -1.52
UBR4-204ENST00000375254 ZFP36L2P47974 494 aaKnown RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 DMRTC2Q8IXT2 367 aaPredicted RBP5.55□□□□□ -1.52
UBR4-204ENST00000375254 CCL1P22362 96 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 FOXI1Q12951 378 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 Q9H3A6 140 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 SPRY3O43610 288 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 HMGA1P17096 107 aaKnown RBP5.54□□□□□ -1.52
UBR4-204ENST00000375254 TARBP1Q13395 1621 aaKnown RBP5.54□□□□□ -1.52
UBR4-204ENST00000375254 IGFBP4P22692 258 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 TMEM14EPQ6UXP3 125 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 TRAV24A0A0B4J272 114 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 DLL3Q9NYJ7 618 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 METTL12A8MUP2 240 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 TMEM171Q8WVE6 324 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 NABP1Q96AH0 204 aa5.54□□□□□ -1.52
UBR4-204ENST00000375254 CELA2BP08218 269 aaPredicted RBP5.54□□□□□ -1.52
UBR4-204ENST00000375254 C5orf64Q2M2E5 130 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms