RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 MPTX1A8MV57 137 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 CHEK1O14757 476 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
CXCL12-202ENST00000374426 KRASP01116 189 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 RLN1P04808 185 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 F2RP25116 425 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 NANOS2P60321 138 aaKnown RBP10.12□□□□□ -0.79
CXCL12-202ENST00000374426 Q56UQ5 140 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 IDNKQ5T6J7 187 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 GATAD1Q8WUU5 269 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 FCAMRQ8WWV6 532 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 RARRES2Q99969 163 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 RHPN1-AS1Q9BWJ2 59 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 C6orf62Q9GZU0 229 aaPredicted RBP10.12□□□□□ -0.79
CXCL12-202ENST00000374426 OR51B2Q9Y5P1 312 aa10.12□□□□□ -0.79
CXCL12-202ENST00000374426 IGHV3-49A0A0A0MS15 119 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 MEIS3P1A6NDR6 274 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 DBX1A6NMT0 343 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 G6PCP35575 357 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 LPAR6P43657 344 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 CBX5P45973 191 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 TFPI2P48307 235 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 HERV-K104P61576 105 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 PRR20EP86478 221 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 PRR20CP86479 221 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 PRR20DP86480 221 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 PRR20BP86481 221 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 PRR20AP86496 221 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 DHRS11Q6UWP2 260 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 CADM3Q8N126 398 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 TMEM116Q8NCL8 245 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 C11orf45Q8TAV5 145 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 FCGR1BQ92637 280 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 BORCS5Q969J3 196 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
CXCL12-202ENST00000374426 EHFQ9NZC4 300 aa10.11□□□□□ -0.79
CXCL12-202ENST00000374426 IGKV3-7A0A075B6H7 116 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 RFX2P48378 723 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-202ENST00000374426 RBMS2Q15434 407 aaKnown RBP10.1□□□□□ -0.79
CXCL12-202ENST00000374426 FAM90A2PQ658T7 463 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 OR1P1Q8NH06 330 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 MOB3AQ96BX8 217 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 DGCR14Q96DF8 476 aaKnown RBP10.1□□□□□ -0.79
CXCL12-202ENST00000374426 MFFQ9GZY8 342 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 DIABLOQ9NR28 239 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 TMEM14BQ9NUH8 114 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 FBXL17Q9UF56 701 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 PRNDQ9UKY0 176 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 RAB26Q9ULW5 256 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 FAT2Q9NYQ8 4349 aa10.1□□□□□ -0.79
CXCL12-202ENST00000374426 PKHD1P08F94 4074 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 DNAH2Q9P225 4427 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 IGHV3OR16-13A0A075B7E8 117 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 IGHV3-74A0A0B4J1X5 117 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 I3L2K1 104 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 NUPL2O15504 423 aaKnown RBP10.09□□□□□ -0.79
CXCL12-202ENST00000374426 SNAPC5O75971 98 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 YIF1AO95070 293 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-202ENST00000374426 GBGT1Q8N5D6 347 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 TMEM56Q96MV1 263 aa10.09□□□□□ -0.79
CXCL12-202ENST00000374426 ZNF2Q9BSG1 426 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-202ENST00000374426 TRAV14DV4A0A0A6YYC5 116 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 LOC100506127A0A0U1RQW1 187 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 C15orf61A6NNL5 157 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 DEFB4AO15263 64 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 IFNA4P05014 189 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 SLC25A46Q96AG3 418 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 NXF2Q9GZY0 626 aaKnown RBP10.08□□□□□ -0.8
CXCL12-202ENST00000374426 IFT46Q9NQC8 304 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 ANAPC10Q9UM13 185 aa10.08□□□□□ -0.8
CXCL12-202ENST00000374426 XRCC3O43542 346 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 CA1P00915 261 aaPredicted RBP10.07□□□□□ -0.8
CXCL12-202ENST00000374426 IGHV3-48P01763 117 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 PMP2P02689 132 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 MFAP4P55083 255 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 CMTM1Q8IZ96 169 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 TSPAN14Q8NG11 270 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 C2CD4CQ8TF44 421 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 CMTM3Q96MX0 182 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 TSC22D3Q99576 134 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 TXN2Q99757 166 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 FXYD6Q9H0Q3 95 aa10.07□□□□□ -0.8
CXCL12-202ENST00000374426 GPR31O00270 319 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 MT-CO2P00403 227 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 TCF24Q7RTU0 167 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 LILRB2Q8N423 598 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 ZNF114Q8NC26 417 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
CXCL12-202ENST00000374426 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
CXCL12-202ENST00000374426 NAT1P18440 290 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 TCTAP57738 103 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 TAS2R46P59540 309 aa10.05□□□□□ -0.8
CXCL12-202ENST00000374426 PAFAH1B2P68402 229 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms