RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 DLL3Q9NYJ7 618 aa11.29□□□□□ -0.6
RAPGEF1-201ENST00000372189 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
RAPGEF1-201ENST00000372189 PGPEP1LA6NFU8 196 aa11.29□□□□□ -0.6
RAPGEF1-201ENST00000372189 GNG5P63218 68 aa11.29□□□□□ -0.6
RAPGEF1-201ENST00000372189 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 LY6EQ16553 131 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 Q96M66 194 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 IGHV1-2P23083 117 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 LHX2P50458 406 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 LINC00869P0C866 280 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 SLC25A53Q5H9E4 307 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 FAM168AQ92567 244 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 MGAMO43451 1857 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 HAX1O00165 279 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 C1QTNF9P0C862 333 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 SRIP30626 198 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
RAPGEF1-201ENST00000372189 H3BTX0 84 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 HERV-K104P63124 156 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 SSTR5P35346 364 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 CLEC7AQ9BXN2 247 aa11.27□□□□□ -0.6
RAPGEF1-201ENST00000372189 NINQ8N4C6 2090 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 IGHV2OR16-5A0A0B4J2B6 119 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 DPM2O94777 84 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 PTGDSP41222 190 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 NRN1LQ496H8 165 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 SAMD5Q5TGI4 173 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 TCF23Q7RTU1 214 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR9G1Q8NH87 305 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 CKS2P33552 79 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 GALNT14Q96FL9 552 aa11.27□□□□□ -0.61
RAPGEF1-201ENST00000372189 VENTXO95231 258 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 TMEM30BQ3MIR4 351 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 MRPL20Q9BYC9 149 aaKnown RBP11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 E9PLN8 166 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 SEC11AP67812 179 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 VKORC1Q9BQB6 163 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 ANKRD36A6QL64 1941 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 PKIGQ9Y2B9 76 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 PGPA6NDG6 321 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 GHRHP01286 108 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 TFPI2P48307 235 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 UNC119Q13432 240 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
RAPGEF1-201ENST00000372189 FXYD3Q14802 87 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 HTN1P15515 57 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 MAS1LP35410 378 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 C19orf24Q9BVV8 132 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 SHISA3A0PJX4 238 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 CD5P06127 495 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 DCTN5Q9BTE1 182 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 C17orf82Q86X59 251 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 RETNQ9HD89 108 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 ABCA7Q8IZY2 2146 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 ZNF818PQ6ZRF7 136 aa11.25□□□□□ -0.61
RAPGEF1-201ENST00000372189 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 GRIFINA4D1Z8 144 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 RPL8P62917 257 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 A0A0G2JK05 382 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 ZG16O60844 167 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 THY1P04216 161 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 PRB4P10163 310 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 PSG1P11464 419 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 C20orf173Q96LM9 149 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 RTN4RQ9BZR6 473 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 A0A087WWC5 75 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR11H1Q8NG94 326 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
RAPGEF1-201ENST00000372189 TRAV41A0A0B4J266 112 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms