RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HIST1H1AQ02539 215 aaPredicted RBP13.36□□□□□ -0.27
COL17A1-202ENST00000369733 OR10J6PQ8NGY7 276 aa13.36□□□□□ -0.27
COL17A1-202ENST00000369733 COX6CP09669 75 aa13.36□□□□□ -0.27
COL17A1-202ENST00000369733 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
COL17A1-202ENST00000369733 BRWD3Q6RI45 1802 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 IGLV3-32A0A0A0MS00 114 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 FOXL1Q12952 345 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 ZNF664Q8N3J9 261 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 TRBV20OR9-2A0A075B6H5 130 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 H3BUT2 72 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 TIMP3P35625 211 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 MTURNQ8N3F0 131 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 TMEM171Q8WVE6 324 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 METTL26Q96S19 204 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 CRYGSP22914 178 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 IGKV1-27A0A075B6S5 117 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 FOXC1Q12948 553 aa13.35□□□□□ -0.27
COL17A1-202ENST00000369733 SH2D7A6NKC9 451 aaPredicted RBP13.34□□□□□ -0.27
COL17A1-202ENST00000369733 PSG7Q13046 419 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 Q6ZT83 130 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 TET1Q8NFU7 2136 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 FHL1Q13642 323 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 SRSF7Q16629 238 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL17A1-202ENST00000369733 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 EFNA2O43921 213 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 ID1P41134 155 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 EFNB3Q15768 340 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
COL17A1-202ENST00000369733 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 OR11H2Q8NH07 326 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 GPR82Q96P67 336 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 PILRBQ9UKJ0 227 aa13.34□□□□□ -0.27
COL17A1-202ENST00000369733 NDUFS8O00217 210 aa13.33□□□□□ -0.27
COL17A1-202ENST00000369733 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.27
COL17A1-202ENST00000369733 PHLDA3Q9Y5J5 127 aa13.33□□□□□ -0.27
COL17A1-202ENST00000369733 GNG5P63218 68 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 LDLRAD2Q5SZI1 272 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 AGMATQ9BSE5 352 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 FREM3P0C091 2139 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 GZMBP10144 247 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 TTC32Q5I0X7 151 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 KBTBD11-OT1A0A1B0GTJ5 212 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 DLX6P56179 175 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 LOXL3P58215 753 aa13.33□□□□□ -0.28
COL17A1-202ENST00000369733 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
COL17A1-202ENST00000369733 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 OR9G9P0C7N8 305 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 TEX45Q8NA69 505 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 DERL1Q9BUN8 251 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 A0A1B0GW15 77 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 FAM53AQ6NSI3 398 aaPredicted RBP13.32□□□□□ -0.28
COL17A1-202ENST00000369733 IMMP1LQ96LU5 166 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 Q9H3A6 140 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 NKX2-8O15522 239 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 NEUROG1Q92886 237 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 IQCF6A8MYZ5 107 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 CRXO43186 299 aaPredicted RBP13.32□□□□□ -0.28
COL17A1-202ENST00000369733 EFEMP2O95967 443 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 CLPSP04118 112 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 LINC00614P0C842 121 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
COL17A1-202ENST00000369733 MRPL16Q9NX20 251 aaKnown RBP13.32□□□□□ -0.28
COL17A1-202ENST00000369733 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 C5orf63A6NC05 138 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 FOXI3A8MTJ6 420 aaPredicted RBP13.31□□□□□ -0.28
COL17A1-202ENST00000369733 CELA3BP08861 270 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 CECR9P0C854 216 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 CFPP27918 469 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 NABP1Q96AH0 204 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
COL17A1-202ENST00000369733 FAM201AQ5SY85 155 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 SAMD13Q5VXD3 122 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 RNASEH2CQ8TDP1 164 aaKnown RBP13.31□□□□□ -0.28
COL17A1-202ENST00000369733 C5orf30Q96GV9 206 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 FOXC2Q99958 501 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
COL17A1-202ENST00000369733 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 UNQ5815/PRO19632Q6UWF5 114 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 MESP1Q9BRJ9 268 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 GP6Q9HCN6 339 aa13.31□□□□□ -0.28
COL17A1-202ENST00000369733 ZSWIM8A7E2V4 1837 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 397.8 ms