RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CDRT1O95170 752 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 SOX14O95416 240 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 APOA2P02652 100 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OR13C7P0DN81 318 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 HIST1H1EP10412 219 aaKnown RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 HSD11B1P28845 292 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 AGTR1P30556 359 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OPRK1P41145 380 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 EIF1P41567 113 aaKnown RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TGM4P49221 684 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF133P52736 654 aaPredicted RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 RPL26P61254 145 aaKnown RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 SNRPD2P62316 118 aaKnown RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 PEA15Q15121 130 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 GUK1Q16774 197 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TRMT12Q53H54 448 aaKnown RBP1.03□□□□□ -2.25
BRCA1-202ENST00000354071 LINC00483Q53H64 154 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 FAM162BQ5T6X4 162 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM215Q68D42 235 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 SVBPQ8N300 66 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM86BQ8N661 226 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 GPR32P1Q8NGA4 272 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OR11G2Q8NGC1 345 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OR5H6Q8NGV6 325 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 TLCD1Q96CP7 247 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OR10C1Q96KK4 312 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 PRAP1Q96NZ9 151 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 OR12D3Q9UGF7 316 aa1.03□□□□□ -2.25
BRCA1-202ENST00000354071 HIVEP2P31629 2446 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ARID1AO14497 2285 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NEBP20929 6669 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TRAPPC13A5PLN9 417 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF850A8MQ14 1090 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC16A4O15374 487 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 RBFOX2O43251 390 aaKnown RBP eCLIP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 FADS1O60427 444 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 EDF1O60869 148 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 IFNA1P01562 189 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 HLA-DQA1P01909 254 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 S100A8P05109 93 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 C8orf88P0DMB2 117 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PRTN3P24158 256 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC6A1P30531 599 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 VEGFCP49767 419 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TMBIM6P55061 237 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 S100A10P60903 97 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 FLI1Q01543 452 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 BSPH1Q075Z2 132 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 KCNJ8Q15842 424 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ABCA11PQ4W5N1 156 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 HENMT1Q5T8I9 393 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 HACD4Q5VWC8 232 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GLYATQ6IB77 296 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF550Q7Z398 422 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TRAPPC5Q8IUR0 188 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ORMDL3Q8N138 153 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC35G3Q8N808 338 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF439Q8NDP4 499 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TSTD1Q8NFU3 115 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC26A10Q8NG04 563 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 OR5H2Q8NGV7 314 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 OR8S1Q8NH09 359 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 OR2V1Q8NHB1 315 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NEK7Q8TDX7 302 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ARL11Q969Q4 196 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ELSPBP1Q96BH3 223 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CPNE2Q96FN4 548 aaPredicted RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SLC35E1Q96K37 410 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 MCEEQ96PE7 176 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GPER1Q99527 375 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 C12orf57Q99622 126 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CGREF1Q99674 301 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 EBNA1BP2Q99848 306 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ASF1BQ9NVP2 202 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GSKIPQ9P0R6 139 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NOP16Q9Y3C1 178 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 YTHDF2Q9Y5A9 579 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 BAZ2AQ9UIF9 1905 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SCN1AP35498 2009 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ATG2BQ96BY7 2078 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 KIAA0100Q14667 2235 aaKnown RBP1.02□□□□□ -2.25
BRCA1-202ENST00000354071 IGLV1-50A0A075B6I6 118 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PGPA6NDG6 321 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 BBIP1A8MTZ0 92 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 B4DEV8 164 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 M0R129 80 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 OR4Q2P0C623 313 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 AKR1C4P17516 323 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 CXCL12P48061 93 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NDUFA6P56556 154 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 IFITM2Q01629 132 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF616Q08AN1 781 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 PRDX4Q13162 271 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 SCGB2B2Q4G0G5 96 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ACSBG2Q5FVE4 666 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 IDO2Q6ZQW0 420 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 NEGR1Q7Z3B1 354 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 TMED4Q7Z7H5 227 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF709Q8N972 641 aa1.02□□□□□ -2.25
BRCA1-202ENST00000354071 GDPD1Q8N9F7 314 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms