RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 HMSDA8MTL9 139 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 TCF21O43680 179 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 ZNF546Q86UE3 836 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 ZNF114Q8NC26 417 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 SLC24A4Q8NFF2 622 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 HYLS1Q96M11 299 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 REG1AP05451 166 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 HTR2BP41595 481 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 AKIRIN2Q53H80 203 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 SPANXN5Q5MJ07 72 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 NOXA1Q86UR1 476 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 TMEM68Q96MH6 324 aa21.29■■□□□ 1
SSBP4-202ENST00000348495 FAM24AA6NFZ4 105 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 C15orf62A8K5M9 175 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 NPIPB5A8MRT5 1133 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 CRYGCP07315 174 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 RNASE2P10153 161 aaKnown RBP21.28■■□□□ 1
SSBP4-202ENST00000348495 CTRB1P17538 263 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 CAV2P51636 162 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 CTRB2Q6GPI1 263 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 TMEM14EPQ6UXP3 125 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 TTC9CQ8N5M4 171 aa21.28■■□□□ 1
SSBP4-202ENST00000348495 AP4M1O00189 453 aa21.27■■□□□ 1
SSBP4-202ENST00000348495 ATP5IP56385 69 aaPredicted RBP21.27■■□□□ 1
SSBP4-202ENST00000348495 TMEM252Q8N6L7 170 aa21.27■■□□□ 1
SSBP4-202ENST00000348495 PPP1R14BQ96C90 147 aa21.27■■□□□ 1
SSBP4-202ENST00000348495 P2RX4Q99571 388 aa21.27■■□□□ 1
SSBP4-202ENST00000348495 STRAPQ9Y3F4 350 aaKnown RBP21.27■■□□□ 1
SSBP4-202ENST00000348495 IGSF23A1L1A6 192 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 RNF222A6NCQ9 220 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 G3V318 75 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 IFNA10P01566 189 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 HKR1P10072 659 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 SNCAP37840 140 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 C2orf83Q53S99 150 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 AQP10Q96PS8 301 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 BOLA2-SMG1P6H3BVE0 249 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 ARPC5O15511 151 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 NPY1RP25929 384 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 RPP30P78346 268 aaKnown RBP21.26■□□□□ 0.99
SSBP4-202ENST00000348495 TMEM267Q0VDI3 215 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-202ENST00000348495 ECSCRQ19T08 205 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 TMEM95Q3KNT9 176 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 PVRIGQ6DKI7 326 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 UNQ5815/PRO19632Q6UWF5 114 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 C19orf35Q6ZS72 473 aa21.26■□□□□ 0.99
SSBP4-202ENST00000348495 TRAV41A0A0B4J266 112 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 FBXO24O75426 580 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 TSPAN9O75954 239 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 RPL12P30050 165 aaKnown RBP21.25■□□□□ 0.99
SSBP4-202ENST00000348495 Q6ZSV7 163 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 OR1P1Q8NH06 330 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 NOL4LQ96MY1 436 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-202ENST00000348495 LINC00527Q9UJ94 153 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 F11RQ9Y624 299 aaKnown RBP21.25■□□□□ 0.99
SSBP4-202ENST00000348495 NF1P21359 2839 aa21.25■□□□□ 0.99
SSBP4-202ENST00000348495 PMS2P5A8MQ11 134 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 MFAP2P55001 183 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 DMRT1Q9Y5R6 373 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 METTL15P1P0C7V9 234 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 STPG2Q8N412 459 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 INO80EQ8NBZ0 244 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-202ENST00000348495 FAM110DQ8TAY7 271 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-202ENST00000348495 WNT10AQ9GZT5 417 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 SLC25A31Q9H0C2 315 aa21.24■□□□□ 0.99
SSBP4-202ENST00000348495 PPIFP30405 207 aaKnown RBP21.23■□□□□ 0.99
SSBP4-202ENST00000348495 SUB1P53999 127 aaKnown RBP eCLIP21.23■□□□□ 0.991e-6■□□□□ 8.5
SSBP4-202ENST00000348495 EWSR1Q01844 656 aaKnown RBP eCLIP21.23■□□□□ 0.994e-7■■■■□ 23.8
SSBP4-202ENST00000348495 MFFQ9GZY8 342 aa21.23■□□□□ 0.99
SSBP4-202ENST00000348495 SULT1A1P50225 295 aa21.22■□□□□ 0.99
SSBP4-202ENST00000348495 CFHR3Q02985 330 aa21.22■□□□□ 0.99
SSBP4-202ENST00000348495 ACOT7LQ6ZUV0 252 aa21.22■□□□□ 0.99
SSBP4-202ENST00000348495 HAPLN4Q86UW8 402 aa21.22■□□□□ 0.99
SSBP4-202ENST00000348495 OR5T1Q8NG75 326 aa21.22■□□□□ 0.99
SSBP4-202ENST00000348495 TAF15Q92804 592 aaKnown RBP eCLIP21.22■□□□□ 0.993e-6■■■□□ 16.3
SSBP4-202ENST00000348495 NIPBLQ6KC79 2804 aaeCLIP21.22■□□□□ 0.994e-6■■□□□ 12.5
SSBP4-202ENST00000348495 SOX15O60248 233 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 CRYBA1P05813 215 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 HNRNPCP07910 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
SSBP4-202ENST00000348495 CXCL2P19875 107 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 EIF2B2P49770 351 aaKnown RBP21.21■□□□□ 0.99
SSBP4-202ENST00000348495 NKX2-5P52952 324 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-202ENST00000348495 KLK9Q2XQG4 91 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 SERTAD4Q9NUC0 356 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 KLK9Q9UKQ9 250 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 PRSS46E5RG02 174 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 CST7O76096 145 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 OR8U8P0C7N1 319 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 NUP62P37198 522 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-202ENST00000348495 RAB11AP62491 216 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 NHLH2Q02577 135 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 BAXQ07812 192 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 ARL16Q0P5N6 197 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 ZNF345Q14585 488 aa21.21■□□□□ 0.99
SSBP4-202ENST00000348495 PAIP2BQ9ULR5 123 aaKnown RBP21.21■□□□□ 0.99
SSBP4-202ENST00000348495 LGALSLQ3ZCW2 172 aaPredicted RBP21.2■□□□□ 0.98
SSBP4-202ENST00000348495 ETV3LQ6ZN32 361 aa21.2■□□□□ 0.98
SSBP4-202ENST00000348495 STX12Q86Y82 276 aa21.2■□□□□ 0.98
SSBP4-202ENST00000348495 BSCL2Q96G97 398 aaPredicted RBP21.2■□□□□ 0.98
SSBP4-202ENST00000348495 HSPB11Q9Y547 144 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms