RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 Q6ZS49 121 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 HSD17B11Q8NBQ5 300 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 LY6G5BQ8NDX9 201 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 C8orf46Q8TAG6 207 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 CCDC107Q8WV48 283 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 SMIM4Q8WVI0 70 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 DCTN5Q9BTE1 182 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 ZNF230Q9UIE0 474 aaPredicted RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 HIVEP2P31629 2446 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MEIKINA0A087WXM9 373 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 CENPVL3A0A0U1RRI6 287 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MEIS3P1A6NDR6 274 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 SNURFLB1AK76 121 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 CGB3P0DN86 165 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 CGB7P0DN87 165 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 EDDM3BP56851 147 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 SSBP1Q04837 148 aaKnown RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 OPCMLQ14982 345 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 Q6ZVH6 145 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 TCF23Q7RTU1 214 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 HOGA1Q86XE5 327 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 GVQW1Q8N7I0 195 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 LINC00482Q8N8I6 264 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 OR4K15Q8NH41 348 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 RNASE11Q8TAA1 199 aaKnown RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 LHFPL5Q8TAF8 219 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 H1FXQ92522 213 aaKnown RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 OVOL2Q9BRP0 275 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 PPDPFQ9H3Y8 114 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MAP1LC3AQ9H492 121 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 KLK11Q9UBX7 282 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MTFP1Q9UDX5 166 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 TRAPPC2LQ9UL33 140 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 GOLT1BQ9Y3E0 138 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 FBN1P35555 2871 aaKnown RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 TRAV39A0A0B4J263 110 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 hADV38S2A0JD32 116 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 C15orf65H3BRN8 121 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 ORC5O43913 435 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 RCC1P18754 421 aaPredicted RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 HMGN3Q15651 99 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 C17orf58Q2M2W7 97 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MOB1BQ7L9L4 216 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 OR4D10Q8NGI6 311 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 TBX15Q96SF7 602 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 CCDC32Q9BV29 185 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 LINC00574Q9H8X3 128 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MCUBQ9NWR8 336 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 RPUSD1Q9UJJ7 312 aaKnown RBP4.13□□□□□ -1.75
VCAM1-202ENST00000347652 MGAT4AQ9UM21 535 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 PRELID3BQ9Y3B1 194 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 LINC00312Q9Y6C7 94 aa4.13□□□□□ -1.75
VCAM1-202ENST00000347652 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 WNK2Q9Y3S1 2297 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TRGV10A0A0A0MS01 117 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 A0A1B0GU03 582 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TRDCB7Z8K6 153 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 C12orf77C9JDV5 145 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 J3QRK9 145 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 FOXH1O75593 365 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 NPSP0C0P6 89 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 IGHV4-31P0DP07 118 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 RCVRNP35243 200 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 SMCPP49901 116 aaPredicted RBP4.12□□□□□ -1.75
VCAM1-202ENST00000347652 DLX6P56179 175 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 Q6ZRM9 215 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TMED4Q7Z7H5 227 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 LGI3Q8N145 548 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TMEM229BQ8NBD8 167 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TOMM40LQ969M1 308 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 SCGB3A2Q96PL1 93 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 C2CD3Q4AC94 2353 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 ANKRD20A5PA0PJZ0 165 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 C17orf98A8MV24 154 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 SCTP09683 121 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 PVALBP20472 110 aaPredicted RBP4.12□□□□□ -1.75
VCAM1-202ENST00000347652 HILS1P60008 231 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 HLA-DRB3P79483 266 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 HAGHQ16775 308 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 C11orf42Q8N5U0 333 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 DUSP18Q8NEJ0 188 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 BEST4Q8NFU0 473 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TAF9BQ9HBM6 251 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 ZNF286AQ9HBT8 521 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 TAS2R8Q9NYW2 309 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 CALYQ9NYX4 217 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 ANXA10Q9UJ72 324 aa4.12□□□□□ -1.75
VCAM1-202ENST00000347652 IGHV2-70DA0A0C4DH43 119 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 IGKV1-6A0A0C4DH72 117 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 B4DSR2 109 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 FABP7O15540 132 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 UPK1BO75841 260 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 GCGP01275 180 aa4.11□□□□□ -1.75
VCAM1-202ENST00000347652 HBZP02008 142 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms