RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 COLCA1Q6ZS62 124 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 TCF23Q7RTU1 214 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 WNT10AQ9GZT5 417 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 SPCS3P61009 180 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 GTF2H5Q6ZYL4 71 aa9.83□□□□□ -0.84
HDAC6-201ENST00000334136 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-201ENST00000334136 QTRT1Q9BXR0 403 aaKnown RBP9.83□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A10PA6NDY2 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A18PA6NE21 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A16PA6NEW6 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A20PA6NIJ5 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A8PA6NJQ4 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A7PA6NKC0 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A22PA8MWA6 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A12PA8MX19 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A5PA8MXJ8 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A23PA8MXZ1 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 SCGB2A1O75556 95 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A15PP0C7V4 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A13PP0C7W8 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A14PP0C7W9 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A24PP0C7X0 464 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 SRIP30626 198 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 C18orf12Q96KH6 178 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 AMBPP02760 352 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 ATP5G3P48201 142 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 JOSD1Q15040 202 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-201ENST00000334136 ACP7Q6ZNF0 438 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 ZNRF1Q8ND25 227 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 C14orf144Q96I85 54 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 NPVFQ9HCQ7 196 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 LILRA1O75019 489 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 CRYBB3P26998 211 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 COL8A1P27658 744 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 PRRX1P54821 245 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 TFF3Q07654 80 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 SRSF4Q08170 494 aaKnown RBP9.82□□□□□ -0.84
HDAC6-201ENST00000334136 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 PSMG3Q9BT73 122 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-201ENST00000334136 IGKV1-12A0A0C4DH73 117 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 MARCH11A6NNE9 402 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 IGKV1D-12P01611 117 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 EFNA4P52798 201 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 ZNF738Q8NE65 137 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 RNF2Q99496 336 aa9.82□□□□□ -0.84
HDAC6-201ENST00000334136 RAB29O14966 203 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 RSPO1Q2MKA7 263 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 LRRC75BQ2VPJ9 315 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 WDR82Q6UXN9 313 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 ZNF525Q8N782 197 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 RPEQ96AT9 228 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 SSBP3Q9BWW4 388 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 KLF2Q9Y5W3 355 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 TFPI2P48307 235 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 QRFPP83859 136 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 SMIM15Q7Z3B0 74 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 MOB3BQ86TA1 216 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 MMD2Q8IY49 270 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 GSX1Q9H4S2 264 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 FBLL1A6NHQ2 334 aaKnown RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 IGHV3-48P01763 117 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 ID3Q02535 119 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 FBXL19-AS1Q494R0 122 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 LURAP1LQ8IV03 231 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 OR4B1Q8NGF8 309 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 GTF3AQ92664 365 aaKnown RBP9.81□□□□□ -0.84
HDAC6-201ENST00000334136 CHODLQ9H9P2 273 aa9.81□□□□□ -0.84
HDAC6-201ENST00000334136 J3QR06 171 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
HDAC6-201ENST00000334136 ERASQ7Z444 233 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 OR1B1Q8NGR6 318 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 LEAP2Q969E1 77 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 FLYWCH2Q96CP2 140 aaKnown RBP9.8□□□□□ -0.84
HDAC6-201ENST00000334136 TMEM191AQ9H0A3 160 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 ODAMA1E959 279 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 FOXH1O75593 365 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 NAPSAO96009 420 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 RBP4P02753 201 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 RAB7AP51149 207 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 ZBTB34Q8NCN2 500 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 OR4D5Q8NGN0 318 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 UQCR10Q9UDW1 63 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 REG1BP48304 166 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 FAM216BQ8N7L0 139 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 TMEM56Q96MV1 263 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 ZNF714Q96N38 554 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 TIMM9Q9Y5J7 89 aa9.8□□□□□ -0.84
HDAC6-201ENST00000334136 MALRD1Q5VYJ5 2156 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 SSTR5P35346 364 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 CEACAM3P40198 252 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 CSN1S1P47710 185 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 ARF6P62330 175 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
HDAC6-201ENST00000334136 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 TMEM56-RWDD3S4R434 201 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms