RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 IFNA1P01562 189 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 MC5RP33032 325 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 IFITM10A6NMD0 228 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 KBTBD11O94819 623 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 LMO4P61968 165 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 MED13LQ71F56 2210 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR10P1Q8NGE3 313 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 RITA1Q96K30 269 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 ASH1LQ9NR48 2969 aaKnown RBP16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 SLC39A9Q9NUM3 307 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 LINC00587B1AMM8 73 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 CLDN34H7C241 214 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 LY86O95711 162 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 PRTN3P24158 256 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 LDLRAD2Q5SZI1 272 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 INSIG2Q9Y5U4 225 aa16.36■□□□□ 0.21
RIPPLY3-201ENST00000329553 IGHV1-3A0A0C4DH29 117 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 LY6LH3BQJ8 138 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BKO60814 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 IFNA10P01566 189 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 IGLV2-23P01705 113 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BJP06899 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BOP23527 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BBP33778 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 PDLIM4P50479 330 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 NDUFA6P56556 154 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BDP58876 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BCP62807 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 LCN2P80188 198 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST2H2BEQ16778 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HCP5Q6MZN7 132 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 ACSM6Q6P461 480 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR11H6Q8NGC7 330 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BHQ93079 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BNQ99877 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 HIST1H2BMQ99879 126 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 TMEM147Q9BVK8 224 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 ENSAO43768 121 aaKnown RBP16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 OPN1MWP04001 364 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 OPN1MW2P0DN77 364 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 OPN1MW3P0DN78 364 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 KLRD1Q13241 179 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 ZNF257Q9Y2Q1 563 aa16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 AMMECR1Q9Y4X0 333 aaPredicted RBP16.35■□□□□ 0.21
RIPPLY3-201ENST00000329553 TEX50A0A1B0GTY4 177 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 RRHO14718 337 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 TRGC2P03986 189 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 CD81P60033 236 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 PAX2Q02962 417 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 MOB3BQ86TA1 216 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 RPEQ96AT9 228 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 FAM210BQ96KR6 192 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 HINT2Q9BX68 163 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 S100PP25815 95 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 RPP30P78346 268 aaKnown RBP16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 C1orf122Q6ZSJ8 110 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 TMEM170AQ8WVE7 144 aa16.34■□□□□ 0.21
RIPPLY3-201ENST00000329553 A1L4Q6 167 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 VWC2Q2TAL6 325 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 GGACTQ9BVM4 153 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 CTDSP1Q9GZU7 261 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 FKBP11Q9NYL4 201 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 UTP20O75691 2785 aaKnown RBP16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 UBR5O95071 2799 aaPredicted RBP16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 MBP02144 154 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 MEF2BQ02080 365 aaPredicted RBP16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 SPNS3Q6ZMD2 512 aa16.33■□□□□ 0.2
RIPPLY3-201ENST00000329553 TRBV24-1A0A075B6N3 115 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 CTXND1A0A1B0GTU2 59 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 TGOLN2O43493 480 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 HTR1DP28221 377 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 PRCDQ00LT1 54 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 VMO1Q7Z5L0 202 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 KIR3DL3Q8N743 410 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 TMEM167AQ8TBQ9 72 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 ENY2Q9NPA8 101 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 NAT8Q9UHE5 227 aa16.32■□□□□ 0.2
RIPPLY3-201ENST00000329553 WNK2Q9Y3S1 2297 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 MDKP21741 143 aaPredicted RBP16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 FGF7P21781 194 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 USF1P22415 310 aaPredicted RBP16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 LGALS7P47929 136 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 CYP2G1PQ6ZSU1 146 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 VSTM2AQ8TAG5 236 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 DPM3Q9P2X0 92 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 PHOX2AO14813 284 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 SLC25A17O43808 307 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 NDUFS6O75380 124 aaKnown RBP16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 TPTE2P1Q5T6R2 138 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 OR10G9Q8NGN4 311 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 OR10G7Q8NGN6 311 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 OR5B3Q8NH48 314 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 OR4A5Q8NH83 315 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 ABHD5Q8WTS1 349 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 SSX3Q99909 188 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 SLC25A22Q9H936 323 aa16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 GAR1Q9NY12 217 aaKnown RBP16.31■□□□□ 0.2
RIPPLY3-201ENST00000329553 IGHV2-70DA0A0C4DH43 119 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms