RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TRBV9A0A0B4J1U6 114 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 C13orf42A0A1B0GVH6 325 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 APELAP0DMC3 54 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 MYOD1P15172 320 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 SNCAP37840 140 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 ATP5IP56385 69 aaPredicted RBP13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 RUNX1Q01196 453 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 WT1-ASQ06250 92 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 TNFRSF9Q07011 255 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 SRSF4Q08170 494 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 ZNF491Q8N8L2 437 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 OR52B4Q8NGK2 314 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 OR1P1Q8NH06 330 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 SEC22CQ9BRL7 303 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 HSPB7Q9UBY9 170 aa13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 F11RQ9Y624 299 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-201ENST00000309328 NUDT19A8MXV4 375 aa13.94□□□□□ -0.18
SSSCA1-201ENST00000309328 PITX3O75364 302 aa13.94□□□□□ -0.18
SSSCA1-201ENST00000309328 OR10W1Q8NGF6 305 aa13.94□□□□□ -0.18
SSSCA1-201ENST00000309328 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
SSSCA1-201ENST00000309328 KLK15Q9H2R5 256 aa13.94□□□□□ -0.18
SSSCA1-201ENST00000309328 CEBPZOSA8MTT3 80 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 CORTO00230 105 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 HTR2BP41595 481 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 RHOGP84095 191 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 KLHL30-AS1Q8NEE0 82 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 CXorf58Q96LI9 332 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 MS4A10Q96PG2 267 aa13.93□□□□□ -0.18
SSSCA1-201ENST00000309328 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 ADARB2-AS1A8MUL3 147 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 ATP5G2Q06055 141 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 ATP6V0BQ99437 205 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 HEYLQ9NQ87 328 aaPredicted RBP13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 U3KQ87 197 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 DNHD1Q96M86 4753 aa13.92□□□□□ -0.18
SSSCA1-201ENST00000309328 C7orf66A4D0T2 115 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 ADAP1O75689 374 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 REG1AP05451 166 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 LGALS1P09382 135 aaKnown RBP13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 RPP30P78346 268 aaKnown RBP13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 TATDN3Q17R31 274 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 IAH1Q2TAA2 248 aaPredicted RBP13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 UXS1Q8NBZ7 420 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 DTD1Q8TEA8 209 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 FANCD2OSQ96PS1 177 aa13.91□□□□□ -0.18
SSSCA1-201ENST00000309328 A0A1W2PRX2 142 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 MYCNOSP40205 109 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 EXOSC2Q13868 293 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 OXA1LQ15070 435 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 C15orf32Q32M92 178 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 SLC25A24Q6NUK1 477 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 GSG1LQ6UXU4 331 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 LCNL1Q6ZST4 164 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 VN1R17PQ8TDU5 208 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 P2RX4Q99571 388 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 GAR1Q9NY12 217 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 FBXL7Q9UJT9 491 aa13.9□□□□□ -0.18
SSSCA1-201ENST00000309328 TRBV7-1A0A0A6YYK4 115 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 C5orf51A6NDU8 294 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 I3L521 148 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 WRBO00258 174 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 SSNA1O43805 119 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 OR2J3O76001 311 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 NKX2-1P43699 371 aaPredicted RBP13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 ID3Q02535 119 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 BSXQ3C1V8 233 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 PRR31Q5SQ13 230 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 ZNF343Q6P1L6 599 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 EEF1AKMT3Q96AZ1 226 aa13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 RANGRFQ9HD47 186 aaPredicted RBP13.89□□□□□ -0.19
SSSCA1-201ENST00000309328 TET2Q6N021 2002 aaPredicted RBP13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 SYNGR2O43760 224 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 PF4P02776 101 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 PRH1P02810 166 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 SPNP16150 400 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 CYCSP99999 105 aaKnown RBP13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 C2orf83Q53S99 150 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 PVRIGQ6DKI7 326 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 ZBTB8BQ8NAP8 495 aaPredicted RBP13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 C2orf50Q96LR7 162 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 RBKSQ9H477 322 aa13.88□□□□□ -0.19
SSSCA1-201ENST00000309328 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 CCL24O00175 119 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 HSPB1P04792 205 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 OR8U8P0C7N1 319 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 ZP3P21754 424 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 DPF1Q92782 380 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 GNB4Q9HAV0 340 aa13.87□□□□□ -0.19
SSSCA1-201ENST00000309328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 RPS10-NUDT3A0A1W2PQS6 291 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms