RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 STHQ8IWL8 128 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 CACNA1IQ9P0X4 2223 aa14.49□□□□□ -0.09
SHANK1-201ENST00000293441 HIST1H2BAQ96A08 127 aa14.49□□□□□ -0.09
SHANK1-201ENST00000293441 JMJD8Q96S16 334 aa14.49□□□□□ -0.09
SHANK1-201ENST00000293441 GATA2P23769 480 aaPredicted RBP14.49□□□□□ -0.09
SHANK1-201ENST00000293441 DICER1Q9UPY3 1922 aaKnown RBP14.49□□□□□ -0.09
SHANK1-201ENST00000293441 CFHR1Q03591 330 aa14.49□□□□□ -0.09
SHANK1-201ENST00000293441 TBX6O95947 436 aaPredicted RBP14.49□□□□□ -0.09
SHANK1-201ENST00000293441 BIVMQ86UB2 503 aa14.49□□□□□ -0.09
SHANK1-201ENST00000293441 TRAV40A0A0B4J280 105 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 OR52E5Q8NH55 327 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 LYZL4Q96KX0 146 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 LDLRAD2Q5SZI1 272 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 OR11H4Q8NGC9 324 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 WFIKKN1Q96NZ8 548 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 TMEM133Q9H2Q1 129 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 DOCK4Q8N1I0 1966 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 TCRBV4S1A1TA0A5B7 111 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 SHISA3A0PJX4 238 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 GRIFINA4D1Z8 144 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 HINT1P49773 126 aaPredicted RBP14.48□□□□□ -0.09
SHANK1-201ENST00000293441 PSMG3Q9BT73 122 aaPredicted RBP14.48□□□□□ -0.09
SHANK1-201ENST00000293441 TRGV2A0A075B6R0 118 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 HBBP68871 147 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 MRAP2Q96G30 205 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 GNLYP22749 145 aa14.48□□□□□ -0.09
SHANK1-201ENST00000293441 A0A1B0GTI1 187 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 FOLR2P14207 255 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 H7C1H1 209 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 COPS9Q8WXC6 57 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 RTBDNQ9BSG5 229 aaPredicted RBP14.47□□□□□ -0.09
SHANK1-201ENST00000293441 ZP1P60852 638 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 RNASEH2CQ8TDP1 164 aaKnown RBP14.47□□□□□ -0.09
SHANK1-201ENST00000293441 SBF1O95248 1867 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 GGACTQ9BVM4 153 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 SCO2A0A1W2PP80 73 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 OR10S1Q8NGN2 331 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 RPRMQ9NS64 109 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 TMEM160Q9NX00 188 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 LTBP1Q14766 1721 aa14.47□□□□□ -0.09
SHANK1-201ENST00000293441 PEX7O00628 323 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 SCGB1A1P11684 91 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 PMCHL1Q16048 86 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 TMEM170BQ5T4T1 132 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 MIR17HGQ75NE6 70 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 ATOH7Q8N100 152 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 RCC1LQ96I51 464 aaKnown RBP14.46□□□□□ -0.09
SHANK1-201ENST00000293441 C18orf15Q96N68 181 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 SDF2L1Q9HCN8 221 aa14.46□□□□□ -0.09
SHANK1-201ENST00000293441 PLSCR2Q9NRY7 297 aa14.46□□□□□ -0.1
SHANK1-201ENST00000293441 UCP1P25874 307 aa14.46□□□□□ -0.1
SHANK1-201ENST00000293441 GPX4P36969 197 aaPredicted RBP14.46□□□□□ -0.1
SHANK1-201ENST00000293441 MORN2Q502X0 79 aa14.46□□□□□ -0.1
SHANK1-201ENST00000293441 FGFBP3Q8TAT2 258 aa14.46□□□□□ -0.1
SHANK1-201ENST00000293441 MRPL13Q9BYD1 178 aaKnown RBP14.46□□□□□ -0.1
SHANK1-201ENST00000293441 MPTX1A8MV57 137 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 CRIPAKQ8N1N5 446 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 YPEL1O60688 119 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 IGHV1-46P01743 117 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 YPEL2Q96QA6 119 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 Q9H3A6 140 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 CEP290O15078 2479 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 CA7P43166 264 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 TMEM70Q9BUB7 260 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 FAM71F2Q6NXP2 309 aa14.45□□□□□ -0.1
SHANK1-201ENST00000293441 FOXA3P55318 350 aaPredicted RBP14.44□□□□□ -0.1
SHANK1-201ENST00000293441 PAPPA-AS1Q5QFB9 102 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 FMC1Q96HJ9 113 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 ALKBH7Q9BT30 221 aaPredicted RBP14.44□□□□□ -0.1
SHANK1-201ENST00000293441 UPK2O00526 184 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 C2orf88Q9BSF0 95 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 ZNF318Q5VUA4 2279 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 IGLV3-32A0A0A0MS00 114 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 CBLN1P23435 193 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 C8orf46Q8TAG6 207 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 BEX4Q9NWD9 120 aaPredicted RBP14.44□□□□□ -0.1
SHANK1-201ENST00000293441 SLC17A3O00476 420 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 IGFBP3P17936 291 aaPredicted RBP14.44□□□□□ -0.1
SHANK1-201ENST00000293441 REC114Q7Z4M0 266 aa14.44□□□□□ -0.1
SHANK1-201ENST00000293441 TRBV9A0A0B4J1U6 114 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 MYOD1P15172 320 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 RHOGP84095 191 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 LINC00527Q9UJ94 153 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 RAMP3O60896 148 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 SRD5A1P18405 259 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 UNQ6494/PRO21346Q6UXR6 183 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 TMEM167AQ8TBQ9 72 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 ANK1P16157 1881 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 PRELID3AQ96N28 172 aa14.43□□□□□ -0.1
SHANK1-201ENST00000293441 MRPS16Q9Y3D3 137 aaKnown RBP14.43□□□□□ -0.1
SHANK1-201ENST00000293441 ARHGEF17Q96PE2 2063 aaPredicted RBP14.43□□□□□ -0.1
SHANK1-201ENST00000293441 TIMM23O14925 209 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 FABP2P12104 132 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 LEMD1Q68G75 181 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 CD8AP01732 235 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 ATP5G3P48201 142 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 JOSD1Q15040 202 aaPredicted RBP14.42□□□□□ -0.1
SHANK1-201ENST00000293441 SELENOKQ9Y6D0 94 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 DOCK6Q96HP0 2047 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms