RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FABP6P51161 128 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 TMEM97Q5BJF2 176 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 ACP7Q6ZNF0 438 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 C10orf35Q96D05 121 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 SPCS1Q9Y6A9 102 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 NCKAP5O14513 1909 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 A0A1W2PNU3 283 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 C9JCJ5 164 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 RHBDL1O75783 438 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 STAG3L2P0CL84 134 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 G6PCP35575 357 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 PIGCQ92535 297 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 RAB1CQ92928 201 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 A0A0J9YW62 118 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 K7EQM0 130 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 ZNHIT1O43257 154 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 HIST1H1EP10412 219 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 GNG4P50150 75 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 DSCR4P56555 118 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 MIC13Q5XKP0 118 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 SSX8Q7RTT4 187 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 NABP1Q96AH0 204 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 ZNF391Q9UJN7 358 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 KCNS2Q9ULS6 477 aa12.99□□□□□ -0.33
CTDSP1-201ENST00000273062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 PATE4P0C8F1 98 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 TCTAP57738 103 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 C19orf24Q9BVV8 132 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
CTDSP1-201ENST00000273062 IGHV1-24A0A0C4DH33 117 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 SP9P0CG40 484 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 NTF4P34130 210 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 NBEAQ8NFP9 2946 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 KIR2DS1A0A191URI9 304 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 SMIM27A0A1W2PRY6 76 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 PSMB11A5LHX3 300 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 H3BRM9 83 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 ADH4P08319 380 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 IGFBP2P18065 325 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 KIR2DS4P43632 304 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 SEC11AP67812 179 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 KIR2DS1Q14954 304 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 CD300EQ496F6 205 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 C6orf15Q6UXA7 325 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 TMEM251Q8N6I4 163 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-201ENST00000273062 OR10J4P0C629 311 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 GCHFRP30047 84 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 B3GALT5-AS1P59052 145 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 TMEM42Q69YG0 159 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 TMEM116Q8NCL8 245 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 FAM216AQ8WUB2 273 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 USF3Q68DE3 2245 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 NPIPA3F8WFD2 350 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 CXorf1O96002 111 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 MFAP2P55001 183 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 NRN1LQ496H8 165 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 C11orf52Q96A22 123 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
CTDSP1-201ENST00000273062 A0A1W2PPM0 123 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 ZNF816Q0VGE8 651 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 RAB31Q13636 194 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 KLF5Q13887 457 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 TPRX1Q8N7U7 411 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 VSTM2AQ8TAG5 236 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 SSMEM1Q8WWF3 244 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 SS18L2Q9UHA2 77 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 WDR83OSQ9Y284 106 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 NEURL1O76050 574 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 CELA3AP09093 270 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 CAMPP49913 170 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 TMEM177Q53S58 311 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 WIPI1Q5MNZ9 446 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 R4GN57 208 aa12.95□□□□□ -0.34
CTDSP1-201ENST00000273062 HELTA6NFD8 242 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 ISLRO14498 428 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 IGLV2-8P01709 118 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 P04436 131 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 LINC00696Q6ZRV3 163 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 MRPL21Q7Z2W9 205 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 TXNDC17Q9BRA2 123 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 LY96Q9Y6Y9 160 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 DOCK10Q96BY6 2186 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms