RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
SLC1A4-201ENST00000234256 UQCRFS1P47985 274 aa14.36□□□□□ -0.11
SLC1A4-201ENST00000234256 TMEM106BQ9NUM4 274 aa14.36□□□□□ -0.11
SLC1A4-201ENST00000234256 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 ZNF883P0CG24 379 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 TMEM183AQ8IXX5 376 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 OR4D5Q8NGN0 318 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 ABHD17AQ96GS6 310 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 MRPL20Q9BYC9 149 aaKnown RBP14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 SPRR3Q9UBC9 169 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 CLEC7AQ9BXN2 247 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 IFI27L2Q9H2X8 130 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 NDUFA2O43678 99 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 LINC00205P59089 165 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 WNT10AQ9GZT5 417 aa14.35□□□□□ -0.11
SLC1A4-201ENST00000234256 BTF3P20290 206 aaKnown RBP14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 HGFACQ04756 655 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 RALYQ9UKM9 306 aaKnown RBP14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 MED13Q9UHV7 2174 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 VENTXO95231 258 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 KIR2DL2P43627 348 aaPredicted RBP14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 BSPH1Q075Z2 132 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 Q0VFX4 171 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 ZNF324BQ6AW86 544 aaPredicted RBP14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 ZNF497Q6ZNH5 498 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 FAM19A2Q8N3H0 131 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 ZCCHC14Q8WYQ9 949 aaKnown RBP14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 OR4C46A6NHA9 309 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 QRFPP83859 136 aa14.34□□□□□ -0.11
SLC1A4-201ENST00000234256 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 LYNX1G3V0Z9 82 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 IGHV3-23P01764 117 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 LYNX1P0DP58 116 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 HOXA5P20719 270 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 CD24P25063 80 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 TMEM78Q5T7P6 136 aa14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 MBNL2Q5VZF2 373 aaKnown RBP14.33□□□□□ -0.11
SLC1A4-201ENST00000234256 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 SRSF9Q13242 221 aaKnown RBP eCLIP14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 KCNS1Q96KK3 526 aa14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 TSC2P49815 1807 aa14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 MFAP4P55083 255 aa14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 MRPS18CQ9Y3D5 142 aaKnown RBP14.33□□□□□ -0.12
SLC1A4-201ENST00000234256 DNM1P46Q6ZS02 220 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 CD5P06127 495 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 BMI1P35226 326 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 ANKHD1Q8IWZ3 2542 aaKnown RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 RBFOX2O43251 390 aaKnown RBP eCLIP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BKO60814 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BJP06899 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BOP23527 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BBP33778 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 CA7P43166 264 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 COMPP49747 757 aaPredicted RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BDP58876 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BCP62807 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST2H2BEQ16778 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 OR4B1Q8NGF8 309 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BHQ93079 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 C16orf92Q96LL3 132 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HS3ST6Q96QI5 342 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BNQ99877 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 HIST1H2BMQ99879 126 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 MORN2Q502X0 79 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 C2orf83Q53S99 150 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 RNASE7Q9H1E1 156 aaKnown RBP14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 KLK15Q9H2R5 256 aa14.32□□□□□ -0.12
SLC1A4-201ENST00000234256 FAM106CPP0CH98 169 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 LY6EQ16553 131 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 LRTM2Q8N967 370 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 COLCA2A8K830 154 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 AMY1AP04745 511 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 GFI1BQ5VTD9 330 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 MYOZ3Q8TDC0 251 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 LIPFP07098 398 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 C14orf144Q96I85 54 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 ATG101Q9BSB4 218 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 ZNF207O43670 478 aaKnown RBP14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 IL18BPO95998 194 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 OR9G9P0C7N8 305 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 ZNF502Q8TBZ5 544 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
SLC1A4-201ENST00000234256 FREM1Q5H8C1 2179 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 SAA1P0DJI8 122 aaPredicted RBP14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 RNFT1Q5M7Z0 435 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 TUBA4BQ9H853 241 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 PIEZO2Q9H5I5 2752 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 CTAG1AP78358 180 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 LEMD1Q68G75 181 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 RPP25LQ8N5L8 163 aaKnown RBP14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 C2CD3Q4AC94 2353 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 IGKV3D-15A0A087WSY6 115 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 IGHV3-66A0A0C4DH42 116 aa14.3□□□□□ -0.12
SLC1A4-201ENST00000234256 E9PQ18 207 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms