RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 IMMP2LQ96T52 175 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 WDFY4Q6ZS81 3184 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 TM4SF5O14894 197 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 IGKV1-16P04430 117 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 HIST1H1BP16401 226 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 LCN2P80188 198 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 C10orf113Q5VZT2 155 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 DIRC2Q96SL1 478 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 ZNF835Q9Y2P0 537 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 PMCHP20382 165 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 BRWD1-AS2P59051 145 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 CENPWQ5EE01 88 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 Q6ZS92 163 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 OR1L4Q8NGR5 311 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 OR5B3Q8NH48 314 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 FAM215AQ9Y5M1 114 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 LINC00312Q9Y6C7 94 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 SLC25A5P05141 298 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 DDTP30046 118 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 NUBP1P53384 320 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 OR4C13Q8NGP0 309 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 OR9G1Q8NH87 305 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 TMEM170AQ8WVE7 144 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 RPEQ96AT9 228 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 GAFA1Q96PS6 74 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 DLL1O00548 723 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 FOXH1O75593 365 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 CD3EP07766 207 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 C8orf88P0DMB2 117 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 FAM169BQ8N8A8 192 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 VDAC2P45880 294 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 LOXL3P58215 753 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 COL6A3P12111 3177 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
UBE2D4-201ENST00000222402 USF1P22415 310 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 OSR1Q8TAX0 266 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 AMBPP02760 352 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 MLANAQ16655 118 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 C17orf58Q2M2W7 97 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 IGFL2Q6UWQ7 119 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 PAXXQ9BUH6 204 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 ZNF586Q9NXT0 402 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 WASHC3Q9Y3C0 194 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 TLN1Q9Y490 2541 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 MMP23AO75900 390 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 MAS1LP35410 378 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 OR2T6Q8NHC8 308 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 RAB1CQ92928 201 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 MRPL18Q9H0U6 180 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 GATCO43716 136 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 KIAA1644Q3SXP7 199 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 C10orf55Q5SWW7 151 aa12.28□□□□□ -0.44
UBE2D4-201ENST00000222402 ZNF788Q6ZQV5 615 aa12.27□□□□□ -0.44
UBE2D4-201ENST00000222402 RNF2Q99496 336 aa12.27□□□□□ -0.44
UBE2D4-201ENST00000222402 YTHDF2Q9Y5A9 579 aaKnown RBP12.27□□□□□ -0.44
UBE2D4-201ENST00000222402 A0A1W2PRD5 423 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 A0A1W2PRF3 423 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 A0A1W2PRM7 423 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 ZNF253O75346 499 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 CFHR2P36980 270 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 SEM1Q6ZVN7 128 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 TMEM68Q96MH6 324 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 PROP1O75360 226 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 RBP4P02753 201 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 AMTP48728 403 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 CAMPP49913 170 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 PRRX1P54821 245 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 TMEM30BQ3MIR4 351 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 TEX38Q6PEX7 206 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 PDPNQ86YL7 162 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 BORCS7Q96B45 105 aa12.27□□□□□ -0.45
UBE2D4-201ENST00000222402 SSTP61278 116 aa12.26□□□□□ -0.45
UBE2D4-201ENST00000222402 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
UBE2D4-201ENST00000222402 ASCL5Q7RTU5 278 aa12.26□□□□□ -0.45
UBE2D4-201ENST00000222402 K7EM74 188 aa12.26□□□□□ -0.45
UBE2D4-201ENST00000222402 GCGP01275 180 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms