RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tmem239Q9DA47 151 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Klk4Q9Z0M1 255 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm12666A2AMD0 254 aaKnown RBP11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1471F6QVZ8 314 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm10666K7N6B8 321 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Vmn1r121K7N6J4 314 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Fosl2P47930 326 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Jsrp1Q3MI48 332 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm21943Q5FWD5 227 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Opn5Q6VZZ7 377 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Mtch1Q791T5 389 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Cldn23Q9D7D7 296 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 HpgdsQ9JHF7 199 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Vamp5Q9Z2P8 102 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm39566A0A1B0GT45 1251 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm21616B6ZB74 166 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm17333C6EQI3 125 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr117L7N1Z1 317 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tcl1b1P56840 116 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rac3P60764 192 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tbrg1Q3UB74 406 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 SepsecsQ6P6M7 504 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm13757Q7TR17 305 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Nmes1Q810Q5 83 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Zfp3Q8BLB0 497 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr130Q8VFC1 317 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1170Q8VFG1 316 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1155Q8VFR3 314 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Mpped1Q91ZG2 326 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rab30Q923S9 203 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Efcab10Q9D581 132 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Borcs8Q9D6Y4 120 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Nova1Q9JKN6 507 aaKnown RBP11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Ighv1-47A0A0A6YY41 117 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Igkv6-14A0A140T8P1 115 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm5108J3QP01 101 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 SrcP05480 541 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Cks2P56390 79 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tra2aQ6PFR5 281 aaKnown RBP11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr494Q8VG07 314 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Abhd14aQ922Q6 247 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Msmo1Q9CRA4 293 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Prss8Q9ESD1 342 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Chst4Q9R1I1 388 aa11.47□□□□□ -0.57
Nup88-201ENSMUST00000035283 Ighv5-12A0A075B5Q4 117 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gabrg3P27681 467 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Smad4P97471 551 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm5771Q792Y9 245 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Q8CF25 301 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Slc6a8Q8VBW1 640 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Nkg7Q99PA5 165 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rnd2Q9QYM5 227 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Wnt16Q9QYS1 364 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Mnx1Q9QZW9 404 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gabrg1Q9R0Y8 465 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Trex2Q9R1A9 236 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 Plxnb1Q8CJH3 2119 aa11.46□□□□□ -0.57
Nup88-201ENSMUST00000035283 FmodP50608 376 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Snrnp70Q62376 448 aaKnown RBP11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Bud31Q6PGH1 103 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ino80cQ8BHA0 191 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Chrdl1Q920C1 447 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Mrpl30Q9D7N6 160 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ms4a4bQ9ES61 226 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Kcnip3Q9QXT8 256 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Slc25a10Q9QZD8 287 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Slurp1Q9Z0K7 110 aa11.46□□□□□ -0.58
Nup88-201ENSMUST00000035283 Muc5acE9QAQ8 3455 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Scgb1b12A0A087WP21 93 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Rab4aP56371 218 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tcl1b2P56841 117 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Q3U595 105 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Slc25a26Q5U680 274 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 SergefQ80YD6 464 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Nadk2Q8C5H8 452 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cypt1Q8CH20 168 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Sf3b5Q923D4 86 aaKnown RBP11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr926Q9EQ98 308 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Sfrp4Q9Z1N6 351 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Dock10Q8BZN6 2150 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr709-ps1A0A140T8J9 307 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 FasP25446 327 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Fgf12P61329 243 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cdk2P97377 346 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Clec12bQ149M0 275 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Lrrc30Q3UV48 300 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Zfp948Q6DFU8 667 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 G6pc3Q6NSQ9 346 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Poc1bQ8BHD1 476 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Pgam5Q8BX10 288 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tmem170aQ9D342 144 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Mmp1aQ9EPL5 464 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cst10Q9JM84 148 aa11.45□□□□□ -0.58
Nup88-201ENSMUST00000035283 OdamA1E960 273 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Slc25a53A2AF28 346 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm14408E9Q6B9 136 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Foxl2O88470 375 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 P01657 111 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cxcl10P17515 98 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Hsf5Q5ND04 624 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms