RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 UPK3AO75631 287 aa13.99□□□□□ -0.17
CACNA1A-258ENST00000638029 ERVK11-1P61568 191 aa13.99□□□□□ -0.17
CACNA1A-258ENST00000638029 KCNE5Q9UJ90 142 aa13.99□□□□□ -0.17
CACNA1A-258ENST00000638029 RAG2P55895 527 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 STPG2Q8N412 459 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 PMCHL2Q9BQD1 86 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 BRCA1P38398 1863 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 P2RY4P51582 365 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 FDCSPQ8NFU4 85 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 ATG4DQ86TL0 474 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 CHCHD5Q9BSY4 110 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 FOXA3P55318 350 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 SLC25A2Q9BXI2 301 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 SRSF6Q13247 344 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 XAF1Q6GPH4 301 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 ADARB2-AS1A8MUL3 147 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 FAM214BQ7L5A3 538 aa13.98□□□□□ -0.17
CACNA1A-258ENST00000638029 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 IGHV3-53P01767 116 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 PTPRDP23468 1912 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 PEX11BO96011 259 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 CEACAM8P31997 349 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 SLC25A28Q96A46 364 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 SDF2L1Q9HCN8 221 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 RPL36A-HNRNPH2H7BZ11 118 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 LRTM2Q8N967 370 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 ZNF414Q96IQ9 312 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 CHST5Q9GZS9 411 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 J3QT63 122 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 OR2H2O95918 312 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 LILRA6Q6PI73 481 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 NPIPB11E5RHQ5 1161 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 FXYD1O00168 92 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 HPRT1P00492 218 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 DOCK4Q8N1I0 1966 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 CDCP2Q5VXM1 449 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 VN1R4Q7Z5H5 301 aa13.97□□□□□ -0.17
CACNA1A-258ENST00000638029 HBDP02042 147 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 SP9P0CG40 484 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 SIGMAR1Q99720 223 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 MPV17P39210 176 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 WDFY2Q96P53 400 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 WDR54Q9H977 334 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 ASIPP42127 132 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 RFLNBQ8N5W9 214 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 HMGCLL1Q8TB92 370 aa13.96□□□□□ -0.17
CACNA1A-258ENST00000638029 ARHGAP21Q5T5U3 1957 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 DPRXA6NFQ7 191 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 TMEM250H0YL14 139 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 SSBP4Q9BWG4 385 aaPredicted RBP13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 BSPH1Q075Z2 132 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 KIAA0040Q15053 153 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 DNAJC4Q9NNZ3 241 aa13.96□□□□□ -0.18
CACNA1A-258ENST00000638029 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 C10orf111Q8N326 155 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 NPIPB4C9JG80 1138 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 CTDSPLO15194 276 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 TMEM167AQ8TBQ9 72 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 ZNF585BQ52M93 769 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 JPT2Q9H910 190 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 H7C1H1 209 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 C1QL2Q7Z5L3 287 aa13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 PUSL1Q8N0Z8 303 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-258ENST00000638029 A0A087WX48 190 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 NDUFS5O43920 106 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 EREGO14944 169 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 APOBEC3AP31941 199 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 ZNF430Q9H8G1 570 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 GSN-AS1Q9NRJ2 163 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 C7orf66A4D0T2 115 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 SH3BGRL3Q9H299 93 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 OGG1O15527 345 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 LHFPL4Q7Z7J7 247 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 ZNRF1Q8ND25 227 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 DMRT1Q9Y5R6 373 aa13.94□□□□□ -0.18
CACNA1A-258ENST00000638029 STRCP1A6NGW2 1772 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 PRB2P02812 416 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 ZIC1Q15915 447 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 IGHV1-45A0A0A0MS14 117 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 OR11H12B2RN74 326 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 TMEM50AO95807 157 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 UNC119Q13432 240 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 OR11H1Q8NG94 326 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 OR11H2Q8NH07 326 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 LINC00527Q9UJ94 153 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 NPIPB8E9PQR5 432 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 NPIPB9F8W1W9 429 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 NPIPB7O75200 414 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 PPIFP30405 207 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 LINC00518Q8N0U6 118 aa13.93□□□□□ -0.18
CACNA1A-258ENST00000638029 OR13A1Q8NGR1 328 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms