RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TEX36Q5VZQ5 186 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
GPC3-204ENST00000631057 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 CISD2Q8N5K1 135 aaKnown RBP6.62□□□□□ -1.35
GPC3-204ENST00000631057 RBMXL3Q8N7X1 1067 aaKnown RBP6.62□□□□□ -1.35
GPC3-204ENST00000631057 DEFB108BQ8NET1 73 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 ACY3Q96HD9 319 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 PCGF1Q9BSM1 259 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 ELOVL1Q9BW60 279 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
GPC3-204ENST00000631057 ZNF257Q9Y2Q1 563 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 OR51B2Q9Y5P1 312 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 MUC6Q6W4X9 2439 aa6.62□□□□□ -1.35
GPC3-204ENST00000631057 PTPRZ1P23471 2315 aaPredicted RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 ACACAQ13085 2346 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 MDFIC2A0A1B0GVS7 189 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 A8MXE2 369 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 UPK2O00526 184 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 NDUFB4O95168 129 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 CA2P00918 260 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 TNFRSF1AP19438 455 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 GNG10P50151 68 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 MEF2CQ06413 473 aaPredicted RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 PDZD11Q5EBL8 140 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 DUX4L9Q6RFH8 374 aaPredicted RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 TMEM108Q6UXF1 575 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 SLC25A48Q6ZT89 311 aaKnown RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 TCF23Q7RTU1 214 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 FAM216BQ8N7L0 139 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 OR1P1Q8NH06 330 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 SSMEM1Q8WWF3 244 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 NEUROG1Q92886 237 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 CCL13Q99616 98 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 GAL3ST2Q9H3Q3 398 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 PLEKHA3Q9HB20 300 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 SLC35D1Q9NTN3 355 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 FKBP11Q9NYL4 201 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 TP53TG5Q9Y2B4 290 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 LINC00312Q9Y6C7 94 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 ARL2-SNX15V9GYD0 113 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 XKRY2A2RUG3 117 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 LOC400499M0QZD8 3231 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 HIST1H1BP16401 226 aaKnown RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 BMP5P22003 454 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 CHRNA7P36544 502 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 FAM27E3Q08E93 113 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 EFNB3Q15768 340 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 ACTL10Q5JWF8 245 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 UTF1Q5T230 341 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 SSX8Q7RTT4 187 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 OR5T1Q8NG75 326 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 RNASEH2CQ8TDP1 164 aaKnown RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 PACRGQ96M98 296 aaPredicted RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 HIST1H2BLQ99880 126 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 HINT2Q9BX68 163 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 ELOVL5Q9NYP7 299 aa6.61□□□□□ -1.35
GPC3-204ENST00000631057 SLC25A10Q9UBX3 287 aaPredicted RBP6.61□□□□□ -1.35
GPC3-204ENST00000631057 ROS1P08922 2347 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 C16orf97H3BN30 126 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 J3QR06 171 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 DVL1O14640 695 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRRG2O14669 202 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 APOA2P02652 100 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 CT45A6P0DMU7 189 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 CT45A5P0DMU8 189 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 CT45A7P0DMV0 189 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 AREGP15514 252 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 NDUFB7P17568 137 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 CCKARP32238 428 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRR20EP86478 221 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRR20CP86479 221 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRR20DP86480 221 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRR20BP86481 221 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 PRR20AP86496 221 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 FOXL1Q12952 345 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 ZNF833PQ6ZTB9 187 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 TMEM144Q7Z5S9 345 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 OR5B3Q8NH48 314 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 OR5R1Q8NH85 324 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
GPC3-204ENST00000631057 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 SFRP2Q96HF1 295 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 SLC35E1Q96K37 410 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 DERL1Q9BUN8 251 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 SLC45A2Q9UMX9 530 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 LY96Q9Y6Y9 160 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 POLEQ07864 2286 aa6.6□□□□□ -1.35
GPC3-204ENST00000631057 ARFGEF3Q5TH69 2177 aa6.59□□□□□ -1.35
GPC3-204ENST00000631057 TRAV9-1A0A075B6T8 112 aa6.59□□□□□ -1.35
GPC3-204ENST00000631057 C17orf100A8MU93 164 aa6.59□□□□□ -1.35
GPC3-204ENST00000631057 C9JCJ5 164 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms