RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ELK1P19419 428 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 HLA-DMBP28068 263 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 PRSS3P35030 304 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 ARPC4P59998 168 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 ZNF585BQ52M93 769 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 SOHLH1Q5JUK2 328 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 NECAP1Q8NC96 275 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 OR4A5Q8NH83 315 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 OR10J5Q8NHC4 309 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 BET1O15155 118 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 MPPED1O15442 326 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 DIRAS3O95661 229 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 S100A5P33763 92 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 ARL3P36405 182 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 CEACAM6P40199 344 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 ZNF124Q15973 351 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 OR4A47Q6IF82 309 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 Q6ZS49 121 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 MAFIPQ8WZ33 124 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 RABL2AQ9UBK7 228 aaPredicted RBP10.09□□□□□ -0.79
SNX1-214ENST00000625244 ELF5Q9UKW6 265 aaPredicted RBP10.09□□□□□ -0.79
SNX1-214ENST00000625244 RABL2BQ9UNT1 228 aa10.09□□□□□ -0.79
SNX1-214ENST00000625244 RBM7Q9Y580 266 aaKnown RBP10.09□□□□□ -0.79
SNX1-214ENST00000625244 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
SNX1-214ENST00000625244 DPPA5A6NC42 116 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
SNX1-214ENST00000625244 TSPAN4O14817 238 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 TNP2Q05952 138 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 CLEC19AQ6UXS0 136 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 Q6ZRM9 215 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 BEST4Q8NFU0 473 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
SNX1-214ENST00000625244 DIRAS2Q96HU8 199 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 CABLES2Q9BTV7 478 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
SNX1-214ENST00000625244 C11orf54Q9H0W9 315 aaPredicted RBP10.08□□□□□ -0.8
SNX1-214ENST00000625244 C5orf66Q9H5L9 145 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 SCPEP1Q9HB40 452 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 S4R3C0 116 aa10.08□□□□□ -0.8
SNX1-214ENST00000625244 SULT1C2O00338 296 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 CTDSP2O14595 271 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 SSX5O60225 188 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 APOA2P02652 100 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 AMBPP02760 352 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 GSTT2P0CG29 244 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 GSTT2BP0CG30 244 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
SNX1-214ENST00000625244 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 INAFM2P0DMQ5 153 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 ADMP35318 185 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 IL18Q14116 193 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 TNXAQ16473 311 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 C19orf35Q6ZS72 473 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 HOGA1Q86XE5 327 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 Q8NAQ8 132 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 MARC2Q969Z3 335 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 HARBI1Q96MB7 349 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 MRPL27Q9P0M9 148 aaKnown RBP10.07□□□□□ -0.8
SNX1-214ENST00000625244 OR1A1Q9P1Q5 309 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 ANXA10Q9UJ72 324 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 ZNF221Q9UK13 617 aa10.07□□□□□ -0.8
SNX1-214ENST00000625244 MEIS3P1A6NDR6 274 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 PTHLHP12272 177 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 TAS2R46P59540 309 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 MRPS10P82664 201 aaKnown RBP10.06□□□□□ -0.8
SNX1-214ENST00000625244 PRSS8Q16651 343 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 IGSF11Q5DX21 431 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 TTC9CQ8N5M4 171 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 CHRDL1Q9BU40 450 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 SCRT1Q9BWW7 348 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 BATF3Q9NR55 127 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 RDH8Q9NYR8 311 aa10.06□□□□□ -0.8
SNX1-214ENST00000625244 TRBV6-7A0A0A0MS04 114 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 IFNA10P01566 189 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 HLA-DQB1P01920 261 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 RCVRNP35243 200 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 IDO2Q6ZQW0 420 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 FCAMRQ8WWV6 532 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 NXF2Q9GZY0 626 aaKnown RBP10.05□□□□□ -0.8
SNX1-214ENST00000625244 MIXL1Q9H2W2 232 aa10.05□□□□□ -0.8
SNX1-214ENST00000625244 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 FABP12A6NFH5 140 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 EPM2AB3EWF7 344 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 M0R1X1 148 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 FCER2P06734 321 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 TMEM187Q14656 261 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 RNASE12Q5GAN4 147 aaKnown RBP10.04□□□□□ -0.8
SNX1-214ENST00000625244 OR5AP2Q8NGF4 316 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 OR5H2Q8NGV7 314 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms