RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 CUBNO60494 3623 aa6.35□□□□□ -1.39
TARDBP-224ENST00000621573 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 LINC00854A0A1B0GVQ3 168 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 HMX3A6NHT5 357 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 M0QZ24 198 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 RBFOX2O43251 390 aaKnown RBP eCLIP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 RAMP3O60896 148 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 HPRT1P00492 218 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 RPA2P15927 270 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 F2RP25116 425 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 LPAR6P43657 344 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 PIGPP57054 158 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 BRWD1-AS2P59051 145 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 ERVK-16P61578 105 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 NDPQ00604 133 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 TMEM267Q0VDI3 215 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 PJVKQ0ZLH3 352 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 TNXAQ16473 311 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 NSUN5P1Q3KNT7 163 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 ZNF562Q6V9R5 426 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 TBC1D26Q86UD7 250 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 PPP1R27Q86WC6 154 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 LHFPL1Q86WI0 220 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 CCDC71LQ8N9Z2 235 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 DMBX1Q8NFW5 382 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 OR13C8Q8NGS7 320 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 GRPEL2Q8TAA5 225 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 VSTM2AQ8TAG5 236 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 ZNF486Q96H40 463 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 SCGB3A2Q96PL1 93 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 FAM103A1Q9BTL3 118 aaKnown RBP6.34□□□□□ -1.39
TARDBP-224ENST00000621573 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 SLC2A9Q9NRM0 540 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 STAB1Q9NY15 2570 aa6.34□□□□□ -1.39
TARDBP-224ENST00000621573 TRAV41A0A0B4J266 112 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
TARDBP-224ENST00000621573 G3V318 75 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 CREBL2O60519 120 aaPredicted RBP6.33□□□□□ -1.4
TARDBP-224ENST00000621573 OR2A4O95047 310 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 S1PR2O95136 353 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 OPN1MWP04001 364 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 IGF1P05019 195 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 SERPINE2P07093 398 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 CRYGBP07316 175 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 CTSDP07339 412 aaPredicted RBP6.33□□□□□ -1.4
TARDBP-224ENST00000621573 OPN1MW2P0DN77 364 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 OPN1MW3P0DN78 364 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 NQO2P16083 231 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 TAS2R31P59538 309 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 RND3P61587 244 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 BAK1Q16611 211 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 PRSS8Q16651 343 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 CXorf66Q5JRM2 361 aaPredicted RBP6.33□□□□□ -1.4
TARDBP-224ENST00000621573 TEX38Q6PEX7 206 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 UNQ5815/PRO19632Q6UWF5 114 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 COMMD1Q8N668 190 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 TCTEX1D1Q8N7M0 179 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 SGMS2Q8NHU3 365 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 ARPC1AQ92747 370 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 OR2A7Q96R45 310 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 PHB2Q99623 299 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 PLEKHA2Q9HB19 425 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 COMMD9Q9P000 198 aa6.33□□□□□ -1.4
TARDBP-224ENST00000621573 C3orf85A0A1B0GTC6 90 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 A0A1W2PN81 502 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 KRASP01116 189 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 CD40LGP29965 261 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 CHRNA7P36544 502 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 SURF2Q15527 256 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 C2orf68Q2NKX9 166 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 TRIM16LQ309B1 348 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 ZNF585BQ52M93 769 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 TCTEX1D4Q5JR98 221 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 PXDC1Q5TGL8 231 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 OR4A47Q6IF82 309 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 NDUFA11Q86Y39 141 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 MMD2Q8IY49 270 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 PUSL1Q8N0Z8 303 aaKnown RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 LFNGQ8NES3 379 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 OR4A5Q8NH83 315 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 TMEM167AQ8TBQ9 72 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 S100ZQ8WXG8 99 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 SDHCQ99643 169 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 ZNF430Q9H8G1 570 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 ZNF355PQ9NSJ1 428 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 SLC2A8Q9NY64 477 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 GPR132Q9UNW8 380 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 FBXO7Q9Y3I1 522 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 TSSC4Q9Y5U2 329 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-224ENST00000621573 NUBP2Q9Y5Y2 271 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 PLXNB1O43157 2135 aa6.32□□□□□ -1.4
TARDBP-224ENST00000621573 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms